YALI0F31735g

Overview

Description highly similar to uniprot|Q9P839 Candida albicans RNR1 ribonucleotide reductase large subunit
Locus type CDS
Locus tag YALI0F31735g

Location

Species Yarrowia lipolytica Positions 3933682..3936423
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2742 (nuc.)
Previous locus YALI0F31713g Next locus YALI0F31757t

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F31735g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F31735gYALI0F31735g_mRNA-001YALI0F31735g_CDS-001

Nucleotide sequence

 

>YALI0F31735g
ATGTCCAAGCTCTTTGTCATCAAGCGAGACGGCCGCAAGGAGTCGGTCCAGGTCGACAAA
ATCACTGCACGTATCAAGCGTCTGTGTTACGGCCTCGACCCTGACCACGTCGACCCTATC
CAGATCACCCTCAAGATTGCATCCGGTATCTACGAGGGTGTTAGCACTATCGAGCTCGAC
AACCTGGCTGCCGAGACAGCCGCCTACATGACCACTCTGCATCCTGACTATGCGATTCTG
GCTGCCCGAATCGCTGTGTCCAACCTGCATAAGCAGACCAAGAAGCAGTTCTCGCAGGTG
GTTTACGACTTGTACCACTACGTGAACCCCCGAAACAAGAAGCACTCGCCCATGGTCTCC
AAGGAGCTGTACGACACCGTGCAGGCCAACGCCGACGAGCTCAACGGCGCCATTCTCTAC
GACCGAGACTTCACCTACAACTACTTTGGCTTCAAGACCCTGGAGCGAGCATACCTGCTG
CGAGTCAACGGTGCTGTTGCCGAGCGACCCCAACAGATGATCATGCGAGTCTCTGTCGGT
ATCCACGGCGACAACATTGCCCGGGCCATTGAGACCTACAACTATATGTCTCAGAAGTAC
TTCACTCACGCTTCCCCCACTCTCTACAACGCCGGAACTCCCCAGCCTCAGATGTCGTCG
TGTTTCCTTGTCAACATGAAGGACGACTCCATCGACGGCATCTACGATACCCTCAAAACC
TGTGCTCTGATTTCCAAGTCTGCCGGCGGTATCGGTCTGTCTATCCACAACATCCGAGCT
ACTGGCTCCTACATTGCTGGAACTAACGGAACCTCCAACGGTATCGTGCCCATGCTGCGT
GTCTATAACAACACCGCCCGATACGTTGATCAGGGAGGCAACAAGCGACCTGGTGCCTTT
GCAATGTACCTTGAGCCCTGGCACGACGATATCTTCGAGTTCTGCGAGCTGCGAAAGAAC
CACGGAAAGGAAGAGATTCGAGCCCGAGACCTGTTCCTGGCTCTGTGGATCCCCGACCTG
TTCATGGAGCGAGTCGAGCAGAACGCTGAATGGACCCTGATGTGCCCCAACGAGTGCCCC
GGTCTTGACGACGTCTATGGTGATGAGTTTAAGCAGCTGTACGAGCAGTACGAGAAGGAG
GGCCGAGGCCGACGAACCATCCCTGCCCAGAAGCTGTGGTACCACATTCTCGACTGCCAG
ACCGAGTCCGGCAACCCCTTCATGCTGTACAAGGACTCCTGCAACCGAAAGTCCAACCAG
AAGAACCTCGGAACAATTAAGTCTTCTAACCTGTGCTGTGAGATTGTAGAGTACTCTTCT
CCTGATGAGGTCGCTGTCTGCAACCTGGCTTCCATCGCTCTGCCCACTTTTGTTACTCGA
GACGACACCAACTCGTTCTACGACTTCAAGAAGCTGCACGACATTGCCAAGGTCATTGTG
CGAAACCTCAACGCTATCATCGACCGAAACTACTACCCGGTCCCCGAGGCCAAGAAGTCT
AACATGCGACACCGACCCATTGCTCTGGGTGTCCAGGGTCTGGCCGACACCTTCATGGCT
CTACGACTCCCATTTGAGTCCGAGGAGGCCAAGAAGCTCAACATCCAGATCTTCGAGACC
ATCTACCACGGAGCTGTCGAAGCCTCTTACGAGATGGCTCTTGAGGACGGTGCCTACGAG
ACCTTCCAGGGCTCCCCTGCCTCCAAGGGTGACCTCCAGTTCGATCTCTGGAACGTGACT
CCTTCCGAGCTGTGGGAGTGGGACGATCTCAAGGCCAAGATCATGAAGACTGGTATGCGA
AACTCGCTGTTGGTCGCTCCCATGCCCACTGCCTCCACTTCCCAGATTCTTGGTTTCAAT
GAGTGCTTCGAGCCCTACACTTCCAACATTTACTCTCGACGAGTTCTTGCTGGTGAATTC
CAGATTGTCAACCCCTGGCTGCTCAAGGACCTGGTTGAGGTTGGCCTGTGGAACGAGACC
ATGAAGAACCGAATTGTTGCTGACAACGGATCCGTGCAGAACATCCCCAACATTCCCCAG
GAAATCAAGGACCTGTACAAGACCGTGTGGGAGATTTCTCAGAAGCGAATCATTGAGATG
GCCGCTGACCGATCCCCCTTCATTGACCAGTCTCAGTCCCTCAACATTCACATCAAGGAC
CCTACCATGGGCAAGCTCACCTCCATGCACTTCTACGGCTGGAAGAAGGGTCTCAAGACA
GGTATGTACTACCTGCGAACCATGGCTGCTGCTGCCCCCATCCAGTTCACCATTGACCAG
GAGGCTCTCAAGACCATTGACTCCAGCACCGCCAAGGCCATGCTCAACAAGAAGCCCTAC
CAGGAGATCAACTCCATGGCCAACTTGCGGTCCATCGAGGACAAGATTGCCAAGATTGAT
CTGAATGGAGGCAACAAGGAGAACAACGTCATGGAGCTGATCCGAGAGTCCCAGGAAAAG
AAGGAGGCTGAGAAGGAGGCCAAGCGAGTCCCTGCTCCCGTGGCTGAGACCAAGGAGGAG
ACCCAGGAGGAGACCAAGCCCGTTGAAAAGCCTGCTGCTGCTGAAGACAAGCCTGCCGAG
GACTCCCCCATCGCCAAGTCTGAGTACGACATCTATGCAGACAAGGTTCTGGCCTGCTCT
CTGGCCAACCCCGAGTCTTGTGAGATGTGCTCTGGTTAACTTTTGTTATGTTATATATAT
AACTTGCTATTTAATGATAATGATAATGATAATTTGTGACAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F31735g_CDS-001

Protein length: 893 aa.
Product: Ribonucleotide reductase large subunit, putative

>YALI0F31735g_CDS-001 MSKLFVIKRDGRKESVQVDKITARIKRLCYGLDPDHVDPIQITLKIASGIYEGVSTIELD
NLAAETAAYMTTLHPDYAILAARIAVSNLHKQTKKQFSQVVYDLYHYVNPRNKKHSPMVS
KELYDTVQANADELNGAILYDRDFTYNYFGFKTLERAYLLRVNGAVAERPQQMIMRVSVG
IHGDNIARAIETYNYMSQKYFTHASPTLYNAGTPQPQMSSCFLVNMKDDSIDGIYDTLKT
CALISKSAGGIGLSIHNIRATGSYIAGTNGTSNGIVPMLRVYNNTARYVDQGGNKRPGAF
AMYLEPWHDDIFEFCELRKNHGKEEIRARDLFLALWIPDLFMERVEQNAEWTLMCPNECP
GLDDVYGDEFKQLYEQYEKEGRGRRTIPAQKLWYHILDCQTESGNPFMLYKDSCNRKSNQ
KNLGTIKSSNLCCEIVEYSSPDEVAVCNLASIALPTFVTRDDTNSFYDFKKLHDIAKVIV
RNLNAIIDRNYYPVPEAKKSNMRHRPIALGVQGLADTFMALRLPFESEEAKKLNIQIFET
IYHGAVEASYEMALEDGAYETFQGSPASKGDLQFDLWNVTPSELWEWDDLKAKIMKTGMR
NSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWLLKDLVEVGLWNET
MKNRIVADNGSVQNIPNIPQEIKDLYKTVWEISQKRIIEMAADRSPFIDQSQSLNIHIKD
PTMGKLTSMHFYGWKKGLKTGMYYLRTMAAAAPIQFTIDQEALKTIDSSTAKAMLNKKPY
QEINSMANLRSIEDKIAKIDLNGGNKENNVMELIRESQEKKEAEKEAKRVPAPVAETKEE
TQEETKPVEKPAAAEDKPAEDSPIAKSEYDIYADKVLACSLANPESCEMCSG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG