YALI0F31713g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F31713g

Location

Species Yarrowia lipolytica Positions 3929965..3932104
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2140 (nuc.)
Previous locus YALI0F31691g Next locus YALI0F31735g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F31713g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F31713gYALI0F31713g_mRNA-001YALI0F31713g_CDS-001

Nucleotide sequence

 

>YALI0F31713g
ATGACGCCGCGACCGCATTTACAACAAGAGCACGAGTTTTACGTTTCTCCAGGAACCAAA
AACCGCGAGGCGGTGATCGCAGCTATTCCCGGAGTCGAGGTGCTCGCCCCGTCTCGAGAC
ACCATCAACATCTGTGCCAAGCGCGAGATGGCCCATCACAAGCAAATGTACCCTACGTTG
GAGTTTCATGACCGCACCATTCTCAATAAGCTGCGAAGCACACCTTCGCTGGCGCGTGCT
GCTATTCTGGAGACTCCCTCTAAGTTCGCATCGGCGAAGTATCAGAGCAGTGCATCACGG
TTCAAGGCCATGGTCAGACAACAGAGGAGAAGGAGTAAGGGAATACGTGTTGAGACGGTG
GACGATACGTTAGCCGTTGATAAGGATGACGAGGAAGGTGGAGACGATAACCCATTCCAA
CCTGTGAACAAGGAATCTAAGGTCACGGAGCCCGAGGACGAACAGAACGATCAGAGTGAC
TCTGAGGAGTCAGAGGAAGAACAAGAGTCGGAACCCCAAGGTAAAACAGTGAACGTGAAA
AAAGAGGTGACTGACGTCACAGCTTCCCAGATTGATGAGTCCGACAGCTCTGACAACTCG
GGCTCGGACTCGGGAGAGGGAAAGGGATCGGGCCAGGACTCGGACTCTGACGGTCCTGAC
GGTTCTGACAACTCCAACACCACAAACGAGTCGGAGGAATCTGAACAGGAAGGACAGAGA
GAAGAAGAATCGATTCCTGACTCAGTTTCGGAATCGATACTGCCTTCTCTCAAGAAGTCT
CCTCGCAAGAGAGTGTCTATTACTCAACCTTCAATCCGAACCTATCGCAACAAAAGGATC
CGAAAGGTCGAGGAGATTTCAGACTCTGATGATGATTTTGGATCACACACTCAAGAAAGC
CAGGAGTCTGTGAAACCAGAACCCAAGAGGCACGAGAATGACAAGTTCTACGAAGCTGAG
GAGCAGTTTGAAAAGGATGAGGAACAGTTTGAGACCGCCCCAGATCATCTCGGCAATAAA
GGGGAAACAGAGGACGAACCTGTAGATGGTTCCGAGTCAGAATCCGACCGAGAAGCGACT
CCTACAAAAACAAGATCAAGCAGATCTCTCTCCAAGACTCCAGCCGAGGCGCCCAAACTA
TCAACGAGGGCCTCTCAGCCACCGAAGTCACCCACCAAACAACCCAGCGAAGCTCGTAGA
CGACGCCGAGTGTTGCTGGATGAAGACGACGGATTTGATGACGGGTTCGAAACCGAGTTT
TCCCGAGAGCGACAGGCAGAGTTCTTTGTCCAGAGCGACTCTGACCACTACAGTGATGAT
GAATACGGGCAGGACAGAAAGGGGAATGGACACCAAAATGAACATCAAAACAACAGCCGG
GATCAAGTCGCTGTCAAAGAAGATGAAGGAGAATACGCATACGATCATGGAGACGACGAG
GAGAACGAGCATTCAACTCGTGGCGAGTTCGATGACGAGTTTCTGCCGATACAGCCGAGA
CGCCGCGGCAAGCATTCTCTCCAGGGAGGGAAGAAGGGAAGACCACGGGACAAGTTCAAC
CCTTCCAAGGATAGACTGCTCCTGGAAACTTCAGAAACAGCCAAGAAACTGGCTATTCCT
CGCAAGGAGCTCTTTGACCAGCTCACCGCGATGATTGGACACACAGAATTCTCCCTGCAA
ACTCGTCTCTCGAAGCTGGAAGCCGACGAGAATTTACGTGATATAGCCCTCAATGCTCCT
GTCATTGAAGGCGCTTCTGTGAGTGATGTCTTTGCCAAGATCATGCACAAGGCTCAACGA
ACGACGGGACCCAAGCCTCGGGTGCGAATTCCGTACACAGATCTGGACGACCTGGCGATC
AAGGCCTTTGTCTGTGACTTGGACCCCTCAAAACGTGGATCTTATAGCTCATATGAGCCG
TTTGCAGAGAAGTACACTCATCACGACTCCAGCAGTGTGAAGGGTCGATGGACCAAGACA
CTGGGTCCTCGGACTAACGAGATTGAACTGCTGGAGGCTAAGCAAAAGTACACTCCTCAG
CTTGAGCAGCAGTATCTCAACTGGTTACATAATACCTATCCTGCCTTATTCCAGGGATAG
TTAGGTGGTTACATAAATAATTATTTATTTGCATTTGGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F31713g_CDS-001

Protein length: 700 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F31713g_CDS-001 MTPRPHLQQEHEFYVSPGTKNREAVIAAIPGVEVLAPSRDTINICAKREMAHHKQMYPTL
EFHDRTILNKLRSTPSLARAAILETPSKFASAKYQSSASRFKAMVRQQRRRSKGIRVETV
DDTLAVDKDDEEGGDDNPFQPVNKESKVTEPEDEQNDQSDSEESEEEQESEPQGKTVNVK
KEVTDVTASQIDESDSSDNSGSDSGEGKGSGQDSDSDGPDGSDNSNTTNESEESEQEGQR
EEESIPDSVSESILPSLKKSPRKRVSITQPSIRTYRNKRIRKVEEISDSDDDFGSHTQES
QESVKPEPKRHENDKFYEAEEQFEKDEEQFETAPDHLGNKGETEDEPVDGSESESDREAT
PTKTRSSRSLSKTPAEAPKLSTRASQPPKSPTKQPSEARRRRRVLLDEDDGFDDGFETEF
SRERQAEFFVQSDSDHYSDDEYGQDRKGNGHQNEHQNNSRDQVAVKEDEGEYAYDHGDDE
ENEHSTRGEFDDEFLPIQPRRRGKHSLQGGKKGRPRDKFNPSKDRLLLETSETAKKLAIP
RKELFDQLTAMIGHTEFSLQTRLSKLEADENLRDIALNAPVIEGASVSDVFAKIMHKAQR
TTGPKPRVRIPYTDLDDLAIKAFVCDLDPSKRGSYSSYEPFAEKYTHHDSSSVKGRWTKT
LGPRTNEIELLEAKQKYTPQLEQQYLNWLHNTYPALFQG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG