YALI0F31691g

Overview

Description similar to uniprot|P53266 Saccharomyces cerevisiae YGR112w SHY1 SURF homologue protein, pseudogene
Locus type CDS
Locus tag YALI0F31691g
Pseudogene This locus may contain pseudogene(s)

Location

Species Yarrowia lipolytica Positions 3928299..3929461
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1163 (nuc.)
Previous locus YALI0F31669g Next locus YALI0F31713g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F31691g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F31691gYALI0F31691g_mRNA-001YALI0F31691g_CDS-001

Nucleotide sequence

 

>YALI0F31691g
ATGCAAGTTCTCAGAGTGGCTCGATATGGCGCTAGCCGCATTGGAAGGATTTCCACCACA
GCTCCTGCCTTCACTACACTGACCCCTCAATGTGCCTCTCGACAGTTTTCGACCAGAAGC
GCTCTGCTTAACAACAAAAACATGTTCAACACCAACAGTGAAGAACCTAAGCAGCAGAAG
AAGCAGTCTGGAGCTAACGAGCTGGAGAGCGACGAGCCAGAGCCGCAATCACAGAAGAAG
AACCGAAAGCGTTTTGTCTTCCTCGGTCTTTGTGCCCTCATGCCTATCATTTCGGGCTAC
CTTGGCACATGGCAAGTCAAACGTCTGCAGTGGAAGGTGGACAAGATTGCCGATTGTGAG
AACCGACTTCTCCAGGAGCCTCTGCCCCTGCCTGGACACATTACCGAGGACCAGGAGGTT
CTGGAGAGAGAGTTTGAGTACCGAAAGGTGGTGGTTACTGGTACACTGTGCCACGATGAA
GAGTTCCTGGTCGGACCTCGAATGAAGGACTCTGTCGAGGGCTACTTCCTTGTGACTCCT
CTCGACCGATCTAAGACCGGTGGATCCAAGCTGCTGATTAAGCGAGGCTGGATTTCCAAG
GAGATGGCGGACCAAAAGAAACGAGACCCTCTCGCTCTGCCCAAGGGCGAGGTTTCTCTC
GTCTGTCTGCTCAGACCTGTTCCTCTCAAGAACATGTTCACTCCCGATTCCCCAACTTCC
CCCAGTGTCCGAATCTACAACTTCATGGACATTCCGACAATGTCCAAGTTCACCGGAGCT
CAGAACATTTACTTGGAGGAGGAGCTCAACATGCGCCTCGGAGGCCACGAGTGGGTCACC
GAGTCCCATATGATGAACCATGGAGTGCCCATTGGAAAGCTGCCCAAGGTCGATCTTCGA
AACACCCATTTACAGTATATTGCCACCTGGTACGGCGTGTGTGTGTTTACCACCGTCATG
CTTGTCATTATGTGGCGAAAGGGCCGAATGAGCACTCTCGACAAGAAGGTCGCTTACTCT
CGAAAGTACGTTACTTAAGGGAGAATTATTTGTACATAGCTAATAGAGTCTTCACGGAAG
AAGGGGAGAGTGAGCAAGCTTGCGGGCTTGCTTATGAGCGGGTACGAACCTGCTTGTATA
GCTGCATAGCTATCTATTATTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F31691g_CDS-001

Protein length: 387 aa.
Product: Mitochondrial inner membrane protein required for complex IV assembly, putative

>YALI0F31691g_CDS-001 MQVLRVARYGASRIGRISTTAPAFTTLTPQCASRQFSTRSALLNNKNMFNTNSEEPKQQK
KQSGANELESDEPEPQSQKKNRKRFVFLGLCALMPIISGYLGTWQVKRLQWKVDKIADCE
NRLLQEPLPLPGHITEDQEVLEREFEYRKVVVTGTLCHDEEFLVGPRMKDSVEGYFLVTP
LDRSKTGGSKLLIKRGWISKEMADQKKRDPLALPKGEVSLVCLLRPVPLKNMFTPDSPTS
PSVRIYNFMDIPTMSKFTGAQNIYLEEELNMRLGGHEWVTESHMMNHGVPIGKLPKVDLR
NTHLQYIATWYGVCVFTTVMLVIMWRKGRMSTLDKKVAYSRKRYLRENYLYIANRVFTEE
GESEQACGLAYERVRTCLYSCIAIYY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG