YALI0F31669g

Overview

Description similar to uniprot|P25385 Saccharomyces cerevisiae YLR078c BOS1 secretory pathway protein
Locus type CDS
Locus tag YALI0F31669g

Location

Species Yarrowia lipolytica Positions 3926976..3927861
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 886 (nuc.)
Previous locus YALI0F31647g Next locus YALI0F31691g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F31669g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F31669gYALI0F31669g_mRNA-001YALI0F31669g_CDS-001

Nucleotide sequence

 

>YALI0F31669g
ATGAACGCGATTCACAACCATCTGGTGAAGCAGAATGCCAGCTTAAAGAAGGACCTGTCC
GAGTTCTCCGCCAACCCCGCAGGGGCGCCCATGTCGCTACAAGGCCAGATTTCGGCTACC
ATGACCTCCTTCAGCCGAACCCTGGACGACTATTCGGAAATTATCAACAAGGAACACAAC
AAGGAGAAGAAGGAAAAGGCTGAGGCACGTCTGGCTCGGTTTCGTGAAGAGCTGGCCGAC
GCACGAAGCGAGTTCAAGAACCTCAGATCGGCCCGAGAAGAGAAAACGCTAGAGGAGAAC
AAAACGGCGCTGTTTGGAGACAACCCTTACGGCGAGTCGCGAAACAGAAACGTGAACCGA
GACGTGCCGATTCAGCCGACCTACACAGATCTTACACGAGAAGAGGGCATGCAAAGGGAA
CAGTCGTCTCTGAACCAGGTGGGCCAGCAGCTCGACTCATTCATTGAGCAGGGAATGGCT
GCTCTGGGCGACTTGCAGGAGCAGAGCGACATTTTGAGAAGCACCGGAAAGAAGATGCGG
TCTGTGGCCGAGACTCTGGGTCTGTCTCGAGAGACCATCAAGATGGTGGAGAAGAGAGCA
CGACAGGACAAACGGTTTTTCTACGGAGGCATCGTCTTCATGCTCGTGTGTTTCTATTAC
ATCTTGAAGTGGTTCAGTTAGGAGACGACCAGCAAGCTAATGGTCATAAAAACAAAACAA
CGCGACTCAAAACAAAACAAAACAGAGAGCCCAGAGTGAGAGAGAACAGGTACGGTTTAA
TTAACGGTGGAACAATCTTTACATATAATAATAGATAATGGTGGACATGCTGAGGAGGAT
GATACGGAAATTGACTACCTGTATATAGTTACAAGTGAGACAAAAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F31669g_CDS-001

Protein length: 227 aa.
Product: v-SNARE (vesicle specific SNAP receptor), putative

>YALI0F31669g_CDS-001 MNAIHNHLVKQNASLKKDLSEFSANPAGAPMSLQGQISATMTSFSRTLDDYSEIINKEHN
KEKKEKAEARLARFREELADARSEFKNLRSAREEKTLEENKTALFGDNPYGESRNRNVNR
DVPIQPTYTDLTREEGMQREQSSLNQVGQQLDSFIEQGMAALGDLQEQSDILRSTGKKMR
SVAETLGLSRETIKMVEKRARQDKRFFYGGIVFMLVCFYYILKWFS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG