YALI0F31449g

Overview

Description weakly similar to uniprot|B5RUE6 Debaryomyces hansenii DEHA2F11594p
Locus type CDS
Locus tag YALI0F31449g

Location

Species Yarrowia lipolytica Positions 3907896..3911332
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 3437 (nuc.)
Previous locus YALI0F31427g Next locus YALI0F31471g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F31449g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F31449gYALI0F31449g_mRNA-001YALI0F31449g_CDS-001

Nucleotide sequence

 

>YALI0F31449g
ATGGCTGATATGGAAGTGAGTACACCGGCTAAATTGACTCGAGATCCACCGCTAACACAG
ACTACAGCATCGATATCGCGTCATCTGCGACGCAAGGGCGTGCCTCTGGTGCAGATTCTG
CCGTTTGCAAACGAAATTGTAGCCGGAAACCTCAACGTCTACTTTCCCCATCGGTTGTGC
GCAGTTTTGCAATGGTGGATGGACAAAATAAGCGAGAAGACCGACTCTGCCAAGGAGGCT
CGAGCAGACCCGGCATTCTGGACGCTATTCATCACTGTGTGGGAAGACATGGCCAAGGAT
CTGGCCATGCCAAGAGAACGAATCTACAGAAACAGCAAGTTCACAGAGATCGTCAGTCTA
GCCATCAAGGAAAACATTGAGGGCTGCTCCGTTCAGCTGCTGGACGAGATCACCACAGCC
GTCAACAAGGTGTCTCGGTCGTTAGCCGTGCAGTTTACAGAGAGTGCCGCTGTCGAAATC
GCAGGAGACTACCTCAAGACCCTTACAAACTTTCAGAAGACCGGGCTGCCTGTGGGACAC
ATTGCTGGAGTGTCTTCATGGACTCAAATGATCCTCAACTTTTTGGAGCGGTCTTCTCAG
GGAAGTCAGGATATGCAGAAGAAGTGTCGAGAGGTTGGATCGTATCTTCCCTACATTTTC
TATCTATTGGACGGGGAGGATCTAAACAAGGACCTGGCACATTTCATCGATTATCTGGTC
ACCAAATTCCTGTTTGATCCCGAACACTTCCCCATCACTGGTCTGTATGCCTTCACTACT
TTTGAGGTGTTGAGCTTCTCCACTGAGGCTCCTGTTCGAGGCTATGCCCACATTATCAGA
CTGGGAGAAAAGGTGGCTGCTACTATGCCTGGAACCACTGGTGAGAAGGATCTGGTTGTG
CCTCTGGTCAGTGGTCTAATCCAGAATGCCAAGCAGTACACTGTGGAGCTGCTGGATCAG
TGTACAGAGATGGGCTACAAGGTGGAAAAGAGCATTTTGGTGAGGCTTTTCAACGAGGCT
GTGCCTACGAGAGAGGCCTTTGCATTGGATTGGCAGGTGAACAATGAACGAGATTGGCGT
CTGATTGCTGCTTTGGTGCGACAAGATCCTTCACTTACAGCTACTTCGGTGTCTTTGGCC
AAGGATATCTCTGATGGTCCTGATAACGAGTACACGAAGTCGGTGATGCGAGGTATGGCT
ACGGGATACCAGCTCAACAGCAACATGTATGACTTCATCATCATCTGGGTGGATGAGATG
GCCAAGTCTAGTAAGTGGAGAGACCCTGGTTTCCTGCCCTATGTTTCTGATCTCATTGCT
AAAATGTTCCCTGATCAGTACTACGATGTTCTGACTCATTGGACGGGGAAGGTGAAGGAG
GAGCAGGGAGATATTGCTGTCAGAAACAACCAGCTTTATGCTCTTGTTGCAATTGTCAAT
GCTCTTCTGTTTATGAAGCTTGAGGCGTCTTTTGACGAGAAGGTTTTGAAGGTTCTTTCC
AAGCTCATCAAGCTGGAGGATGAGAAGATTGATAGCGAGACACTGTGGCGTCTGCGATAC
ATCATTTTCACAAAGGCACCCAACACTAAGCATAAGATTGATTTCAACGAAGCTGTTGAG
CCTAAGAAGGAGCTATTCAGATATCAGTTTGGATGTCTGTGTCGACTTGCCGAGTTTGAC
AACGTTAAGAAGTTTGATAAGGCTCTTGACAAGCATCTTTCGTACATGGTCAAGAAGAAG
CTGGATGGCATGATTCCCTTCTTGTTTGACCGATGGCTGGTTATTCTCAACCGTTTCGCC
AAGTCTAAACGACTCTGCAAGATTGCCGAGATGGCTGTCTCCACATACGTTACTGAGCTG
GTTCAAAATGACCAGTTATTCGAGCAGACCCATGTGTGGACTCCTGTCTTGGAAAATATC
AAGGACCCCAAGCCTCTCACTGTTGTTCCTTATTCTGCGTTCCCTCGAGATATTCGAATT
GCACTCGTCAACAAGTTTTCTCTAGAGAACCCTACCGCTGAGGGCCTGGAACTTGTCTCG
AGGCTCGTCACATCTTCTACTTTAGGTGGTTACGAGATTGAGAAGGATGTCGACTCTTTC
TGTGTTCTTCTGGACCACGGGTCAGCTCTATCTACTTCTATCTGCTCCACCATTCTGAAG
TCTCATGTTCAGACCAAGAACCAAGATACCAGCAAGGAGTTCCTGGAGACATTGGAAAAG
AAGCTCAAGAAGAACGTCAAGAATAATAAGTCGATCCAGCAGGCTCTGCTGTATGCTCGA
ATTGTGTCGGACGAGGACTCTAACTTCATCAAGTCGATTCGAAAGTCGCTTAAGACTATT
ATTCTCGAGTCCAACGATACAGACCTTGAACCTATTCTGAACGATACCAAGTCTCTAGTC
AAGGTCTTTTCTTCGTCTGATTCAGATGAGGTCGAGACTAAGCTCACTTCTATCATCTCT
AAGCGTGTCGCCTCCAAGACAGAGCATGAAGAAGATACTCTGCTGACTTCTGCTGCGAGC
TTGTTAATGGGCATCTCCAAACCCAACCTAGCCATCACTGCTCTATTCCTTTGCGTTGGA
GAGGGAAATGAACAGCTGTCTAAGTGGTATTCCTTCCATCTCGAGTCTCTGAGTCCCGAG
GAGTTGCGAAACGTCTTTGTCATGGTCGTTCGGTACGGCGAGTCGGCCTATCCCGCATTT
GAGGTCATCATCCGAGTTTTATCGTACGACGAGCATCACGAGATAGACTTTACTTCTCTC
ATTGTGTCTGCCATCTCACAGTATGTCGAGTCTGGAAAGCAGTCTGCCGTTTTCCTGGGA
GCTCTGGCTTCTACGTTGAAACGTGCCCCCTGGGCTGTTTCTCAATACTGTCTGGAGTTG
ATACTTGTGGTTGTTTCGCAGTCTCAGGCCACTCCCGACACATTTGTCGCATTCACTCAG
GTTCTGTCCCAGATTCTGCTCAGTCACAGACCCCGTATTGAGGGCCGATACTCGCTCATC
GTATACAGCTTGAAGGCTCTGCTGAGTGTACTGGTCAAGGGCACCGAGGTGGCTGTGGAG
GACGTTCATTCTCTCGTTCGAGCCGTCCAACTCATCTGTGAGCCCCCTGCGTATACCCTT
TCCAAGACCCGGGCTGCCAAGGTGTCTCTGACGTCAGCCACTCAGGCTGCTCGAAAGGAG
GCAGCTCGTCACATGATCTACTTCCTGGCTGCCTACGCTCACATCAACGTAACCCAGAAG
CTGGATGCCGCGATCACAGTGGCTTTCCGACCCGCCATGTCGTCCATCTTTGAGCTGGTT
ACCAAGGAAGATCTGGATCTAGCCAACTCCATCATGGACGGTCCATCGCGATCCTTCATC
CGAGTCCTCTATGCTGACTACAAGAAGCAGGGCAAGTGGACCGATGATATGTAGATATAT
GCATTAATTAACAAATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F31449g_CDS-001

Protein length: 1123 aa.
Product: Conserved hypothetical protein

>YALI0F31449g_CDS-001 MADMETTASISRHLRRKGVPLVQILPFANEIVAGNLNVYFPHRLCAVLQWWMDKISEKTD
SAKEARADPAFWTLFITVWEDMAKDLAMPRERIYRNSKFTEIVSLAIKENIEGCSVQLLD
EITTAVNKVSRSLAVQFTESAAVEIAGDYLKTLTNFQKTGLPVGHIAGVSSWTQMILNFL
ERSSQGSQDMQKKCREVGSYLPYIFYLLDGEDLNKDLAHFIDYLVTKFLFDPEHFPITGL
YAFTTFEVLSFSTEAPVRGYAHIIRLGEKVAATMPGTTGEKDLVVPLVSGLIQNAKQYTV
ELLDQCTEMGYKVEKSILVRLFNEAVPTREAFALDWQVNNERDWRLIAALVRQDPSLTAT
SVSLAKDISDGPDNEYTKSVMRGMATGYQLNSNMYDFIIIWVDEMAKSSKWRDPGFLPYV
SDLIAKMFPDQYYDVLTHWTGKVKEEQGDIAVRNNQLYALVAIVNALLFMKLEASFDEKV
LKVLSKLIKLEDEKIDSETLWRLRYIIFTKAPNTKHKIDFNEAVEPKKELFRYQFGCLCR
LAEFDNVKKFDKALDKHLSYMVKKKLDGMIPFLFDRWLVILNRFAKSKRLCKIAEMAVST
YVTELVQNDQLFEQTHVWTPVLENIKDPKPLTVVPYSAFPRDIRIALVNKFSLENPTAEG
LELVSRLVTSSTLGGYEIEKDVDSFCVLLDHGSALSTSICSTILKSHVQTKNQDTSKEFL
ETLEKKLKKNVKNNKSIQQALLYARIVSDEDSNFIKSIRKSLKTIILESNDTDLEPILND
TKSLVKVFSSSDSDEVETKLTSIISKRVASKTEHEEDTLLTSAASLLMGISKPNLAITAL
FLCVGEGNEQLSKWYSFHLESLSPEELRNVFVMVVRYGESAYPAFEVIIRVLSYDEHHEI
DFTSLIVSAISQYVESGKQSAVFLGALASTLKRAPWAVSQYCLELILVVVSQSQATPDTF
VAFTQVLSQILLSHRPRIEGRYSLIVYSLKALLSVLVKGTEVAVEDVHSLVRAVQLICEP
PAYTLSKTRAAKVSLTSATQAARKEAARHMIYFLAAYAHINVTQKLDAAITVAFRPAMSS
IFELVTKEDLDLANSIMDGPSRSFIRVLYADYKKQGKWTDDM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG