YALI0F31427g

Overview

Description similar to uniprot|Q99042 Trigonopsis variabilis D- amino acid oxidase
Locus type CDS
Locus tag YALI0F31427g

Location

Species Yarrowia lipolytica Positions 3906513..3907926
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1414 (nuc.)
Previous locus YALI0F31405g Next locus YALI0F31449g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F31427g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F31427gYALI0F31427g_mRNA-001YALI0F31427g_CDS-001

Nucleotide sequence

 

>YALI0F31427g
CCGAACCAATGTTCCAAAACTGTGAACCCGCCATGGCCAAGAAGAATTATGTGGTGATTG
GGTGAGTCTAGAGGGAGGGAGACTGGAGAGAGTCTTTTCAATGGTATTCAACACCCCACA
TTCATCCCTCTAACACAGATCTGGCATTGCAGGACTCACTACTGCTCTGACCCTGTCCAA
GAAACCCAATACCAATGTGACCATCGTTGCCAAACATCTGCCTGGCGATCTCTCAATTGA
TTTCACATCACCCTGGGCTGGAGGAGACTGGGACTCGTTTGCCAAGAAGGACGAGATCAC
GCTTCAAAACTACGACAAGCCTGCGTACCTGGAGTTTCTGCGGCTCTCACGAGAAGTTCC
AGAGGCTGGAATCTGGATCCGACAGGTTACTATTTATTTCCACGACAGAGATATTCCCAA
GAAGAAGGACGGATCTCTCGATACCGACGCCGTGACTCCCTGGTATAGCACCTTTGTGGA
GGGTTGGAGAACTCTTCGAAAGGAGGAGCTCCCTGAGAGAGTGGTCTGGGGCTACACATT
CACATCTGTGGTAATTTCCACTACTCGATACATGTTTTATGTACAGCAGGAATGCGTCAA
GCGGGGCGTACAGTTCCGAAGAGCTACTCTTAAGCATGTCTGTGATGCCAAAAAGTACAC
TGCCTTCCCTGGACCAGTAGACGCCGTGTTCAACTGCTCGGGACTATCTGCCAAGTTTCT
GGGAGGTGTGGAGGACTCTAACATGTACCCCATTCTCGGCCAGACTCTGCTGGTTCGAAA
CAGGACCGAGAGACTGCTCACGTATGTGTCCGTGGATGGCTACGAAGACGAGTGTCTGTA
CATCATGCCTAGAGCCGAAGGAGGCACAGTTCTGGGCGGATGTATGCGAGTCAACGACTG
GTCCACTGAACCTGATAAGGCTCTGGCAGACCGAATTGTTGCCCGAGCAACTAAGGCCTG
TCCTGAGCTGCTGGATGACGGTCCTCTGGATGTTGTTTCTCACAATGTTGGTCGACGGCC
AGCTCGACAGGGCGGTCCTCGAGTTGAGAAGGAGACCATTGACGGAACTGTCGTCATCCA
TAATTACGGAGCCGGTCCCGCTGGTTTCCAGAGCAGTATCGGTATGGCCGAGGCAGCTGT
TGATCTCTTGAAGGGGTCAAGTAAGTTGTAATTGGCAACTTTTCACACGAGTAACATCAC
TAATGGATTATGTGGATCTGATATAACCTGGAGCAGTGGACATTAATGATACGGTCTGTG
TGTTTACATGTGAACTTGATAGCGGTACTACTCGTACATACTATAAATGTCTTGAATCTT
ACTAGTAGTTACTGTTGATCAATTTTGAGCAATTGAATAATAAAAACTACTATACGTGCT
TCCAATTTGTTAATTAATGCATATATCTACATAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F31427g_CDS-001

Protein length: 362 aa.
Product: D-amino acid oxidase, putative

>YALI0F31427g_CDS-001 MFQNCEPAMAKKNYVVIGSGIAGLTTALTLSKKPNTNVTIVAKHLPGDLSIDFTSPWAGG
DWDSFAKKDEITLQNYDKPAYLEFLRLSREVPEAGIWIRQVTIYFHDRDIPKKKDGSLDT
DAVTPWYSTFVEGWRTLRKEELPERVVWGYTFTSVVISTTRYMFYVQQECVKRGVQFRRA
TLKHVCDAKKYTAFPGPVDAVFNCSGLSAKFLGGVEDSNMYPILGQTLLVRNRTERLLTY
VSVDGYEDECLYIMPRAEGGTVLGGCMRVNDWSTEPDKALADRIVARATKACPELLDDGP
LDVVSHNVGRRPARQGGPRVEKETIDGTVVIHNYGAGPAGFQSSIGMAEAAVDLLKGSSK
L*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG