YALI0F30195g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F30195g

Location

Species Yarrowia lipolytica Positions 3776357..3777704
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1348 (nuc.)
Previous locus YALI0F30173g Next locus YALI0F30217g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F30195g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F30195gYALI0F30195g_mRNA-001YALI0F30195g_CDS-001

Nucleotide sequence

 

>YALI0F30195g
ATGGTCCTTCCTAGAAACAAAAGACGGCCCGCTAAGCCCAAGGCGGCACTCAAGCCCGAC
AACCCCGACACAGAGAAGCTCAACAAGCTGTTTGCCGAGCTCACACAGCTCGATGAGGAT
CTCGCAGCAACAGATATCGTGTGGAAGGAGACCAAGAGTGTGGAGAAGAAGACCGACAAG
ACCGATGAGCAGATTTTCGCCACCGTCAGCGACCTAGCGAAATTGTGCCATGCCCACATG
ACCAAGTGTGGTGTGGCCTTCAAGCCCCCTGTGTCCGTGGACATTGCTGTTCATACTGTT
TCTGATCTGCGTAAGGTGTTGCCAGCCTTCACTGGAGAGTATCAGAACTTTGTGTCTCTG
TCTGACAGTAGTGATGCTCACGAATTGATGCAAAAGGAGCTTCGTATTAAGCTTAGAGAT
GTCTGTGGTGGTATTTCGACTTTCAGCCGTGTTGTCCAGTCTCTTCTGAAGATGGATAGT
AAGGCTGCCCAGACTATGCTTGATAACGTGCCTGTAGGTGACAGTGACGACGAAGTGACT
GATGCAATTGGCAACCTCACTGTGGAGGAGGAAGTCAAGGGCCCCGAACTGTCTGCTGAG
GAGCAAGAGGAACAGATTGCTGCTGAAGCATACTCCAAGCAACTGATTCGAGTAGCTCAG
ACCTGGAAATACTGCAACGCCGTCCAGGAGTTCTGCAAGACCCCATTCTTGGACGTCGCC
AAGAGACGTCTCAAGGAGACCTGTTTGGTCATGACTGATGCTGTTAACGAGCTCAAGGAG
TGGCTGGATAATGCTGATGACGAAGATGATGATCCCTTTGGACTGGACGACTATGAAGAC
ACTGATGACGAGGCAGAACCTGCTGCTCCCGCTGCCCCTACTTCCCGAAGCGACGAAATT
GTTGCTTTGGCTGAGAAGTGGCATGCAAAGCTCATTACCCTATTCAAGCTCGTTCAGGCT
CTGGCATCACGATACTCGTCTCTATGCAAGGCTGATGCTGATGCCACTTCCAAGGACAGA
CTTGTAAGTGTCAACTCCCGTATTTATAAGCTTGCTGCCGGCGTCGACGACCTTGTCACC
GGCTTCCTCATGAACAGCTCTGTCGCTGAGCTTGAGGGTGAATCTACCAAACTGGACGAG
CTAGTGCGAGACTTGGCAAAGTCCGAGCGACTCAGCCCCGACGGGTCCAGCGATGCTGTC
ACTGTCTATATTGACAGTGCTTTTTCCTCCGCTTATGGGCTTTAATGAAGGAAATGTCTG
GGCAGTATATAGTATGGATTGAATAACTTCAACGTTGACATCGCTTGTTTTATTAGTGCG
ATCTATTATATGCTATGGTTTTGATGGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F30195g_CDS-001

Protein length: 415 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F30195g_CDS-001 MVLPRNKRRPAKPKAALKPDNPDTEKLNKLFAELTQLDEDLAATDIVWKETKSVEKKTDK
TDEQIFATVSDLAKLCHAHMTKCGVAFKPPVSVDIAVHTVSDLRKVLPAFTGEYQNFVSL
SDSSDAHELMQKELRIKLRDVCGGISTFSRVVQSLLKMDSKAAQTMLDNVPVGDSDDEVT
DAIGNLTVEEEVKGPELSAEEQEEQIAAEAYSKQLIRVAQTWKYCNAVQEFCKTPFLDVA
KRRLKETCLVMTDAVNELKEWLDNADDEDDDPFGLDDYEDTDDEAEPAAPAAPTSRSDEI
VALAEKWHAKLITLFKLVQALASRYSSLCKADADATSKDRLVSVNSRIYKLAAGVDDLVT
GFLMNSSVAELEGESTKLDELVRDLAKSERLSPDGSSDAVTVYIDSAFSSAYGL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG