YALI0F30217g

Overview

Description highly similar to uniprot|Q8X230 Emericella nidulans VpsA GTPase
Locus type CDS
Locus tag YALI0F30217g

Location

Species Yarrowia lipolytica Positions 3778269..3780663
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2395 (nuc.)
Previous locus YALI0F30195g Next locus YALI0F30239g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F30217g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F30217gYALI0F30217g_mRNA-001YALI0F30217g_CDS-001

Nucleotide sequence

 

>YALI0F30217g
ATGGATGAGGATCTAATCAAGACCGTTAACCGTCTTCAGGTGAGTATTACGAGATGATAT
TAACGGGACATATTTCGAAGAAGAGACATGTGACACGGAGCTGGATATTGTGTTGTGCCA
ATCACCAACATGTGCAACTGTAACGTACACCTGGCATAATTCGATGACAAGACTCAACAC
AGAGGGCGACGATGGGCTGGACACAGAGGTTATGTCGTGGAAATTAACATTATTACGAAC
GATGTGATGTTCCGAGGCTTCTACCTACTGATCACAGTCAAGATGGTTCTCCGTAATCTG
TGCATAGCTAGCAGAATGTCTACCGTGCACCCCCACCCCCACGACCTACAAGCTCGCCAC
ATAAACAGCTACTAACCCAGGACGCATTCGCCACACTCGGAACTACTGTCAACCCTATTG
ATCTGCCTCAGATCACTGTGGTGGGCTCGCAATCGTCCGGAAAGTCGTCAGTGTTGGAGA
ACATTGTCGGCCGAGACTTCCTGCCCCGAGGAACGGGAATTGTCACCCGGCGGCCCCTTG
TGCTCCAGCTGACCAACAAACCCGACTCGGAAGAGTACGGAGAGTTCCTGCATCTTCCCG
GCAAAAAGTTCACCGACTTCAACGAGATCCGAAACGAAATTGCCAAGGAAACCGATAAGG
TCACCGGGTCCAACGCAGGCATCTCATCGTCACCCATCAACTTGCGAATCTACTCGCCCA
AGGTGCTTACCCTGACTCTGGTTGATCTACCCGGTCTCACAAAGGTCCCTGTTGGAGATC
AGCCCAAGGACATTGAGCGACAGATCAAGGAAATGGTTCTGGGATTTATTTCCAAGCCCA
ATGCTATCATTCTGTCCGTCACTGCTGCTAACACCGATTTGGCCAACTCTGACGGTCTCA
AGCTCGCCCGAGAAGTCGATCCCGAGGGAACCCGAACCATTGGTGTTCTTACCAAGATTG
ATCTTATGGACCAAGGCACAGACGTCATCGATATTTTGGCTGGCCGAGTTATTCCTCTCA
GATACGGATACGTTCCCGTAATTAACCGAGGCCAGAAGGACATTCAGTCCAACAAGAACA
TTAGCGCTGCTCTAGAGTACGAGAAGAACTTTTTTGAGGGCCACCCCTCGTACCGAGCCA
AGGCTCAGTTCTGCGGAACCCCCTTCCTTGCTCGAAAGCTGAACATGATCCTGCGACACC
ACATCAAGTCACAGCTCCCTGATATCAAGAGCAAGATTCACAGCACTCTTGCGAAGTATC
AGAGCGAGCTTTCTGCCCTGGGAGGTGACGATATGCTTGGATCTCCCTCCAACATCGTTC
TCAACCTCATCACTGAGTTCTCCAATGAGTTCCGAACCAACCTGGATGGTAACTCTCAGG
ACCTGTCTACCAGTGAGCTGTCTGGAGGTGCTCGAGTCTCGTTTGTCTTCCACGAGCTCT
ACGCCAATGGTATTAAGGCTATTGATCCCTTTGACCAGGTTCGAGACGTTGATATTCGAA
CCATTCTGTACAACTCCTCTGGTTCTTCTCCTGCCCTGTTTGTGGGTACCGAGGCCTTCG
AGGTGATTGTCAAGCAGCAGATCAAGCGGTTTGAGGAGCCCTCTCTGAAGTGTGTCGCTC
TTGTCTACGACGAGCTAGTTAGAATTGCTCAGCTGTGTCTTACTCGTCCTGGTATGAAGC
GATACCCCAAGCTCAAGGATCAGATCTTCACTCTGGTTGTCTCTTTCCTCAAGCAGGCTC
TCCTCCCTACCAACACTCTTGTTTCTGACATTGTTTCTGCTGAAGCCTGTTACGTCAACA
CTGGTCACCCCGACTTCATTTCCGGCCACACCGCGCTCTCTCTTATCCACGACAAACACC
ATCCCGCACCAAAGACTGAGGTGATCACCGGCAAGAACAAGCGAGGATCTCCTGCACCTA
CACAGACTGCACAGCCCCCTAAGGATGAATCGAAGGAGGGCGGTTTCTTCGGCTCGTTCT
TCTCTTCCAAGAACAAGAAGAAGATGGCTGAGATGGAGGCTCCTCCTGCCGTTCTCAAGG
CTTCTGGTACTCTGAACGAGAAGGAGTCCATGGAGACAGATGTTATCAAGCTCCTCATCA
CGTCGTACTTCAACATTGTGCGACGAACCATGAACGATTTAGTGCCGAAGGTGATTACTC
TTAACCTGGTCAAGCATTCCAAGGACTTGTTGCAGAAGGAGCTGCTCCAGAAGCTCTACC
TAAATGAGAAGCTCGACGATCTGCTACAGGAGAGTGATTTTACCGTCCAGCGACGAGACG
AATGCAAAAAGATGGTGGACAGTTTGTCCCAGGCAGCAGAAATCGTCGCTTCTGTATAAT
TAGACAAGTACAAGTAGAGAAAAGTCTTATAGTAATGTTATGATGAATCAATGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F30217g_CDS-001

Protein length: 666 aa.
Product: GTPase, putative

>YALI0F30217g_CDS-001 MDEDLIKTVNRLQDAFATLGTTVNPIDLPQITVVGSQSSGKSSVLENIVGRDFLPRGTGI
VTRRPLVLQLTNKPDSEEYGEFLHLPGKKFTDFNEIRNEIAKETDKVTGSNAGISSSPIN
LRIYSPKVLTLTLVDLPGLTKVPVGDQPKDIERQIKEMVLGFISKPNAIILSVTAANTDL
ANSDGLKLAREVDPEGTRTIGVLTKIDLMDQGTDVIDILAGRVIPLRYGYVPVINRGQKD
IQSNKNISAALEYEKNFFEGHPSYRAKAQFCGTPFLARKLNMILRHHIKSQLPDIKSKIH
STLAKYQSELSALGGDDMLGSPSNIVLNLITEFSNEFRTNLDGNSQDLSTSELSGGARVS
FVFHELYANGIKAIDPFDQVRDVDIRTILYNSSGSSPALFVGTEAFEVIVKQQIKRFEEP
SLKCVALVYDELVRIAQLCLTRPGMKRYPKLKDQIFTLVVSFLKQALLPTNTLVSDIVSA
EACYVNTGHPDFISGHTALSLIHDKHHPAPKTEVITGKNKRGSPAPTQTAQPPKDESKEG
GFFGSFFSSKNKKKMAEMEAPPAVLKASGTLNEKESMETDVIKLLITSYFNIVRRTMNDL
VPKVITLNLVKHSKDLLQKELLQKLYLNEKLDDLLQESDFTVQRRDECKKMVDSLSQAAE
IVASV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG