YALI0F29909g

Overview

Description weakly similar to uniprot|Q03104 Saccharomyces cerevisiae YML128c GIN3 unknown function
Locus type CDS
Locus tag YALI0F29909g

Location

Species Yarrowia lipolytica Positions 3745206..3747044
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1839 (nuc.)
Previous locus YALI0F29887g Next locus YALI0F29931g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F29909g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F29909gYALI0F29909g_mRNA-001YALI0F29909g_CDS-001

Nucleotide sequence

 

>YALI0F29909g
ATGGCGGTAGCTCCTCGAATTTTGCTCTCCGCTATCACCCTATTCATCGGCATCTTGCTG
GTGTCCTCTCCTAACAGAAGCAGTCACAACCAGGTCAGCACCTGGTCTTCTCAGGATCTC
CGATCGCTGCTGGAAGACAATGGCGTGACCGTGCCCGAAAAGAGCAACCGAGACGCTCTC
CTTAAGGAGGTCCGAATCCACTGGAACGACCTCACCTCTCCCCTTGACCAGACCTCCACC
ACCGATCTTTCCAAGAAGCTCGGCATCGACGTCGAGCAGCTCTCCTCCAACTGGAAGAAG
TCTCTCGGCAACCTCAAGAACCAGGCCGACGAGACCTGGTCCGCTGCCTGGGCCAAGTCC
TCCAAGCTGGCCGATAACATCTACAACGATGTTAACCTCTGGACCTGGACCTTCAACTCC
TGGTCCAACAAGCAGCTCAACGACCTGCTCGAGTCTGCCAAGATTGTTGTTCCCTCTACT
GCTACCCGAAGTGAGCTCATCAAGGATGTCAAGAAGAACTACCAGAAGATTGCCGAAGCC
GCTGGTGTCACCGGTGCTTCTCCCAAGCCTTCTTACCCCGCCAACTGGCTCTACAACGCC
TGGTCCGATTCTGATCTCAAGAAGTGGCTCGACGAGCGAGGAATTCCTGTCCCCCAGGGC
TCCAAGCGAAACGAGCTGATTGCTGCCGTCCGAAAGAATTCCCGAACCCTTTACGTTAAG
GGTGAGCAAGCTCGAGATAACCTCAAGAAGACCTTCGACATCTCCAAGGAGGATGTCTTC
GACAAGGCTGGCAAGATTCGGGAGAACGTCTTCGACGACTGGTCCAACTCCGAGCTCAAG
TACTGGGCTGACTCCCACGGAATCCCTGTTCCCCAGAACTCTCAGAAGGATGAGGTCCTG
GCCATCGTCCGACGAAACCGACAGCTCCTCTACAACGACTACGAGGATGCCAAAACCACT
TACAAGAAGAAGAATCATGTTCCGTTCGTCAAGCGAGCCGAGGACCTTGCTGACCAGGCC
TTCCAGGAGGCCTCCAAGCTCTGGTCCGAATCCCGACTGGGCTCTTTCCTGGAGTCTCGA
AAGGTTGAGGCTCCCGAGGGTGCCACCAAGGACGATCTTCTCAAGCTTGTGAACCGATAC
CGAAATGCTGCTGGCTCTCAATGGGACTCCCTTTTCGAGTCTTGGGACACCAAGAAGCTT
GAGAATTGGCTCTCTGAGCAGGGACAGGCCGCCAAGGGCTCCCACGACCAGCTCGTTAAG
GAGGCTTCTAAGTACATCAATCAGGCCCAGCACGTTCTTGGTGAGAAGTACGACGTTCTC
TCTGCTGACCTCGACAAGCAGTACAAGGAGGCCAAGAAGACCTCTTTCTCTGAGTGGTCC
GATTCTGACCTTAAGGCTTACCTTGACACCTACGGTATCCCCACCTACCAGGGCTCTACA
CGAAACGAGCTCCTCGCCAAGGCCCGAAAGAACCTGGGTCTCTTCACCCGAGGAGCCGAT
CCCAACATTTGGATCAAGGCCCATGATGGTATCAACAAGTTTCTTGTTTCCACCAAATAC
AAGCTCGTCGACCTTGCCGACAATGTTGCTGACCATGTTCATGAGCATTTCCAGCTCCTG
CCCGGTCGTATCGAACGATTCTCCTCTTGGCTCCTTGCCAAGGCCACTGGCAAGAAGGTC
ATTGTTGTCTAAGGAATGCTGGTTGATGGATATATAAATGTATATGATGATGTTGTATTC
TTGAAGATTTCAGTGAAGAGGGTATTGCGCGAAATGCACAGAAATGTGGAAACATGTACA
TACTGTATGTGATAGAAAAAATTGAAGGGATATGACGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F29909g_CDS-001

Protein length: 564 aa.
Product: Conserved hypothetical protein

>YALI0F29909g_CDS-001 MAVAPRILLSAITLFIGILLVSSPNRSSHNQVSTWSSQDLRSLLEDNGVTVPEKSNRDAL
LKEVRIHWNDLTSPLDQTSTTDLSKKLGIDVEQLSSNWKKSLGNLKNQADETWSAAWAKS
SKLADNIYNDVNLWTWTFNSWSNKQLNDLLESAKIVVPSTATRSELIKDVKKNYQKIAEA
AGVTGASPKPSYPANWLYNAWSDSDLKKWLDERGIPVPQGSKRNELIAAVRKNSRTLYVK
GEQARDNLKKTFDISKEDVFDKAGKIRENVFDDWSNSELKYWADSHGIPVPQNSQKDEVL
AIVRRNRQLLYNDYEDAKTTYKKKNHVPFVKRAEDLADQAFQEASKLWSESRLGSFLESR
KVEAPEGATKDDLLKLVNRYRNAAGSQWDSLFESWDTKKLENWLSEQGQAAKGSHDQLVK
EASKYINQAQHVLGEKYDVLSADLDKQYKEAKKTSFSEWSDSDLKAYLDTYGIPTYQGST
RNELLAKARKNLGLFTRGADPNIWIKAHDGINKFLVSTKYKLVDLADNVADHVHEHFQLL
PGRIERFSSWLLAKATGKKVIVV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG