YALI0F29931g

Overview

Description similar to uniprot|Q12328 Saccharomyces cerevisiae YDL217c TIM22 subunit of the TIM22-complex singleton
Locus type CDS
Locus tag YALI0F29931g

Location

Species Yarrowia lipolytica Positions 3748854..3749717
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 864 (nuc.)
Previous locus YALI0F29909g Next locus YALI0F29975g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F29931g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F29931gYALI0F29931g_mRNA-001YALI0F29931g_CDS-001

Nucleotide sequence

 

>YALI0F29931g
ATGTCAGCTTTTGGATTCCCCGGCGGCGGAGCTCCCACTCCTCCCCAAGGCTCTTTTTGG
GATATGACTCCCGAGCAGCAGGGAATGTACTCGGCCAACCTCATCATGGGCACCATGCAG
TCGTGTCCCGGAAAGTCCGTCATGGCTGGTGTCACCGGTTTCGGACTCGGTGGTGTTTTC
GGTCTTTTCATGGCTTCTGTGAGTATCAACGTGTGGGGATAAGGTGGATTTTGAGTGGTA
ACATGATCGGTCAGGATTTGGGGTCAGTTTGAAGTCAAGTAGACTATCAAATGTGGAGAC
TGGATCACACATGTTGAGTGCTTTGGTGTTTCATATATGCCCTTGAGACGCTCTGAGTAC
ACTCCAAGCGTGTTATAGAGTCCATCGAGTCTCTATCTCAAGTAAATCTCTGCTACTTTC
AACGAATACTAACTAAGATGGCTTATGATGCCCCCGTTGGAATGGGTGTGCAGACAATGT
CCGATCTGCCCTTCAAGCAGCAGATGAAAATCCAGTTCACCGACATGGGTAAGCGAGCAT
GGAGCAGTGCCAAGAACTTCGGTTTCATTGGAGGTGTCTTCTCTGGAACCGAGTGTTGTA
TCGAGTCTCTGCGAGCCAAAAACGATATTTGGAATGGTGTGGCTGCCGGATGTCTAACTG
GTGGAGGCCTGGCCGTCAAGGCTGGCCCCCAGGCCGCTCTTGTTGGCTGTGCCGGTTTCG
CCGCCTTTTCTGCAGCCATCGATGTCTACATGAGATCCGATAACAAGGCTCCTCCTTCCA
CTGATGAAGATCTTTAATTTATTGTACATAGTCTAAATGTGAGAAGTAACTGCTCTTACT
GCTAAGAGTGTAGGCTAAAGAGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F29931g_CDS-001

Protein length: 186 aa.
Product: Essential core component of the mitochondrial TIM22 complex, putative

>YALI0F29931g_CDS-001 MSAFGFPGGGAPTPPQGSFWDMTPEQQGMYSANLIMGTMQSCPGKSVMAGVTGFGLGGVF
GLFMASMAYDAPVGMGVQTMSDLPFKQQMKIQFTDMGKRAWSSAKNFGFIGGVFSGTECC
IESLRAKNDIWNGVAAGCLTGGGLAVKAGPQAALVGCAGFAAFSAAIDVYMRSDNKAPPS
TDEDL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG