YALI0F29887g

Overview

Description similar to uniprot|Q6C5F8 Yarrowia lipolytica YALI0E18458g
Locus type CDS
Locus tag YALI0F29887g

Location

Species Yarrowia lipolytica Positions 3744209..3744996
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 788 (nuc.)
Previous locus YALI0F29865g Next locus YALI0F29909g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F29887g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F29887gYALI0F29887g_mRNA-001YALI0F29887g_CDS-001

Nucleotide sequence

 

>YALI0F29887g
ATGTCCGCCCCAATCCCCCAGCAGCTGCTTCAACAGCCTCCTCCCATGCTCCGTAATCCC
CATCTTGAGTCCCAGCGAGCGCCTCAATCTTCTCAGATTCCCCAAACTCCTCAACAGTCC
CCGAGAACCCTCCATGACCCTCCCCAGCAAGCCACCGACTTCTGGGTCCTCAGCAGCAAT
CTGGCTGCCAATGCTCTCTACTGCGCTGCCTTCCCTCTTCTTACAGGTCTCTATGCTGCT
CGGGGTCTGTCTGATGAGCCTGTCAAGCCTGCCAAGTGGGAGACCAAGCTCATAAAGTTC
TTCAACACTGATGTCGAGAAGCTGAACGAATGCTACTCGCCCCTGGTGGCCCTGGGATTC
CCCTTCTTCGCCGCATATTCCAACAGTATGGGGATTCTGTCGATTCTGTGGTCCAACTGG
ATCGGTCTCATTCAGATTGGCGATGACCAGCACATGCTTAGTTTGCTCCAGGGGGCAGAG
CAGATCACCAAGGGCTTCTCGTGGCTCGCTGGATTCCTCAGTTTGGGCACTCTTGGAATC
TGGACCTACCGAAGACAACAGCGACGATCCGCACAGGCCCCCGGCAAGTCCCGATTGTGG
CTCATCGGTGCCCCTGAGGTCTCTCTTGCCTTCGTCAGTCTCGTATTCTACCCTCTCGTT
GCCACTCCTATTTATTGTGTATAAGACGTGAGCAACAAGGACCTTAGCTGGACGTGCACA
ACCACACTATCCGCAGGTGCTTAGCCCAAGCATAAAACAATGAAATCTATTGAAATTACT
TCTACGAT

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F29887g_CDS-001

Protein length: 228 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F29887g_CDS-001 MSAPIPQQLLQQPPPMLRNPHLESQRAPQSSQIPQTPQQSPRTLHDPPQQATDFWVLSSN
LAANALYCAAFPLLTGLYAARGLSDEPVKPAKWETKLIKFFNTDVEKLNECYSPLVALGF
PFFAAYSNSMGILSILWSNWIGLIQIGDDQHMLSLLQGAEQITKGFSWLAGFLSLGTLGI
WTYRRQQRRSAQAPGKSRLWLIGAPEVSLAFVSLVFYPLVATPIYCV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG