YALI0F29865g

Overview

Description weakly similar to uniprot|B8LYU8 Talaromyces stipitatus conserved hypothetical protein
Locus type CDS
Locus tag YALI0F29865g

Location

Species Yarrowia lipolytica Positions 3738994..3740728
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1735 (nuc.)
Previous locus YALI0F29843g Next locus YALI0F29887g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F29865g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F29865gYALI0F29865g_mRNA-001YALI0F29865g_CDS-001

Nucleotide sequence

 

>YALI0F29865g
ATGTCGTTGCCACAAAACATCCCCGCGGCCCCGGGGAACGAGAACACACCTCCCAGAAAG
CGACCCTCGGGCACTCGCAAATCGTCAGGCACCCACTCGCCGCAGACTTACTCTCCCAAC
TACTCGCCTCAGGGGTACACCTTGTGCTCCAATGGCTGGAACAGCACATCGCTACCTTCC
ACGTCATATCAGGCCTTGGCCGAGCAGCTGGAGATTGAGCGAACAGAAAGCGACAGGATC
CAGCGCCAGGTGGTCGAGCTTCGAGCCAAATGCGAAAAGTTACAGGACGCCCAGGTCCAC
AACGAGGCAACCATCACAGCTCGAGACTTGCGGGTAGAGGAATTGGAACAGCAGTACAAG
CGAGCTTGTGAACATCGACGCAATGCCGAGGAGAGTCTGCTGGGTGAACAGCAACTATTT
ATTACAGAGAAGCACCAGCTGTTCATCAAGCAGAGCGAACTCGAGGAGACCATCTCACAT
CTCAACAAGAAACTCAAGGCCAAGGATGTGGAGCTCGGCGAGTACCAGGAGCGAGAGTCT
GCCAATGCAAGCAACTCTCAGGCCAGTATGGCAGAAGCTGCCAAGAAGGAAGCAGAAGCT
GCGGCCCAGGCGGCCCATGCTCGGGAGACGGCTCTTCAGAAGACCGTTGAGCGGCTCAAG
CAGTCCATCACAGTGCTTGAGACTTCTTCCGAGCAGATAGGACTGGACTTTGCTTCCAAG
GCCACTGCTTTCGACGAGGAGATGCGATCTCTCAAGGAGATCAACAACGGACTGGTCGAG
GAAAACGAAAAGCTGCAGATGCTTGTGGCCGAGAAGATGATCAACGGCGGTCTAAGTCTT
AGCAACGAGCTGGAAATGGCTCTAGCGGAGGAGGATGAGAGCGAGGAGGATGAGGAGGAG
AACGAGTGTGTTGTTGACCAGAGCAATAATCAGGCTAATGAGAAGATCGGTGATGACGAA
GACGAGCCTGCTTACACAGAGTCGACTGTCTCTGTGACCGAGTACGAGAAGATTCGCAAG
GAGCTAGCCAAGATGCGACTCGAGTACCGATCTCTGTATGCCACCAACGAAGGTCTCGTT
TCGTACGTCGAGAGAATGCTTAACCGGCTACTGGAGTACGAGGATTTCCGGGATGGTGTG
CAGAAGAGCACAAAAATCGATGCTGCCAAGGTCGGAGCGTTTTCTCGACGAGTTTCCAGC
CGTGGTGGACCCGGGTCGGCCCTTGAAGACTACTCTCTGCGTGTAGCCAAGCGAGGCGAG
CGACGAGGCGGTGGGTCTGGAGCCAACGACAACGCCAGTATTCATTCGCGTGATAGCACG
TCTTCCTACAACCCACTGAGCACGAATTTGTGGTCTTCTGCATTGTTCAAGGGCGGCCGG
AAGGTTTCCAGCGGAGGAGCCCCTGCCCGGAACGTTTCTCTCGGTATTGATGGCGTTGAG
ACCAATTCCGCAGCAAACTCTGCGGCCCCCTCCACTTCTACAGCCGAAGATTGCATGTCG
CTGAAGTCGGATGTGTCTGTTTCTACCAGCGCCAATGGTGAAGATGGAGATGTCTGTAGC
CCGACAGCGTCCCGAAAGAGCTCTTCTCAATCTCAGAAGGGAGGGCTCAAGCCGCTAAAT
CTGAGAAAGAACAGTGGAGGGACAGAGCACAAGAAGACTGCTGCTGCGGGGCTTTTTGGG
TGGTAGACAGAACGAAGACACGCCATATAGCAGTAATTTAAGCATTAATTTAGAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F29865g_CDS-001

Protein length: 562 aa.
Product: Conserved hypothetical protein

>YALI0F29865g_CDS-001 MSLPQNIPAAPGNENTPPRKRPSGTRKSSGTHSPQTYSPNYSPQGYTLCSNGWNSTSLPS
TSYQALAEQLEIERTESDRIQRQVVELRAKCEKLQDAQVHNEATITARDLRVEELEQQYK
RACEHRRNAEESLLGEQQLFITEKHQLFIKQSELEETISHLNKKLKAKDVELGEYQERES
ANASNSQASMAEAAKKEAEAAAQAAHARETALQKTVERLKQSITVLETSSEQIGLDFASK
ATAFDEEMRSLKEINNGLVEENEKLQMLVAEKMINGGLSLSNELEMALAEEDESEEDEEE
NECVVDQSNNQANEKIGDDEDEPAYTESTVSVTEYEKIRKELAKMRLEYRSLYATNEGLV
SYVERMLNRLLEYEDFRDGVQKSTKIDAAKVGAFSRRVSSRGGPGSALEDYSLRVAKRGE
RRGGGSGANDNASIHSRDSTSSYNPLSTNLWSSALFKGGRKVSSGGAPARNVSLGIDGVE
TNSAANSAAPSTSTAEDCMSLKSDVSVSTSANGEDGDVCSPTASRKSSSQSQKGGLKPLN
LRKNSGGTEHKKTAAAGLFGW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG