YALI0F29843g

Overview

Description similar to uniprot|P00958 Saccharomyces cerevisiae YGR264c MES1 methionyl-tRNA synthetase
Locus type CDS
Locus tag YALI0F29843g

Location

Species Yarrowia lipolytica Positions 3733728..3736113
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2386 (nuc.)
Previous locus YALI0F29821g Next locus YALI0F29865g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F29843g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F29843gYALI0F29843g_mRNA-001YALI0F29843g_CDS-001

Nucleotide sequence

 

>YALI0F29843g
ATGTCCAAACTGCACATTCCCACCCAGGCTGGAGGCCCTGTTGGCGTTTCCGGCGTGGTC
AAGACCGTCGCTGCGGTTCTCAAATTTGCTCCCAAAACCCCTATCGTTGAGGATGACAAC
ATCACCGTCCCCTTCCTCGAGGTTGGCTCCACCAACCTCATCGAGCCCAACTCAGTTGTT
CGATACCTTGCTGGCGCCAAGGAGACCGTTGAATCTAACCTGCTCAAGTACGAGCAGGAG
ACTATCTACCGGCTTCTGACTGGCCAGGCCCAGACGTCTCTGGATGAGTCTATTCTCAAG
CTGTCCACCATCACGTCTGGATCTGCCGAGGAGATTATTGTTTTCGGCTCTCTATTTGCC
CTTAACGAAAAGTCCGGTGAGGCTGGAAAATGGGTTGACGAGCGGCTTGCTTCCAACGAG
ACTCTGGCCCAGGCAATCACTCGAGTCAAAGTCAAGAAGGCCAAGAAGGCCGTGGCTGCT
CCCGTTGATCTGCCTCTCAACACCGGCGAGCAGAACCTGTCCGAGTCCTTCGACGCCAAG
AAGTCCAGCAGCGAGGTCATTAAGCCTGTCCCCGGCCAGCGAAACATCCTCATCACCTCT
GCTCTGCCCTACGTCAACAATGTGCCCCATCTTGGTAACATTATCGGATCCGTTCTGTCG
GCCGATGTCTACTCCCGATACTGCAAGGGCCGAAATTACAACGCCCTTTTCATCTGTGGT
ACTGATGAGTACGGAACTGCCACCGAGACCAAGGCCCTGGAAGAGAAGGTGACCCCTAAG
GAGCTGTGTGACAAGTATCACAAGATTCACAAGGATGTCTACGACTGGTTCCAGATCGGC
TTCGACTACTTTGGCCGGACCACCACTGACAAGCAGACCGAGATTGCTCAGGATATTTTC
ATGAAGCTGCATGACAACGGATACCTCGAGGCCCAGAAGATGACCCAGCTTTACTGCACT
CAGCATAACGCCTTCCTTGCCGACCGATTCGTCGAGGGTATCTGCCCTAAGTGTGGTTAC
GAGGACGCCCGAGGAGACCAGTGTGATGGTTGCGGCACTCTGCTCAACCCCTTTGAGCTC
ATCAAGCCCCGATGTAAGCTTGATGGCTCTTCCCCCGAGGTTCGAGACTCGGAGCACATC
TTCTTGTCTCTCGACAAGCTGCAAAAGGAGACTGTTGAGTGGGCCCAAGAGTCCGCCGAG
AAGGGAGACTGGTCCAAGAACTCTCGAACCATCACTGACGGCTGGCTCAACAATGAGCTG
CACCCACGATGTATCACACGAGACCTGGTTTGGGGTACCCCCGTGCCTCTGGAGGGCTTC
AAGAACAAGGTCCTCTATGTCTGGTTCGACGCTACTATTGGGTACGTCTCGATCACCGCC
AACTACTCCCCCGAGAACTGGAAGGCCTGGTGGAACAACCCGGAGAATGTTGATCTTTAC
CAGTTCATGGGCAAGGATAACGTCCCCTTCCACACTGTCATTTTCCCTGCCACTCTGCTC
GGAACCAAGCAGCCCTGGACCAAGCTCCACCATCTGTCCACCACCGAGTACTTGCAGTAC
GAGGGAGGCAAGTTCTCTAAGTCTCGAGGAGTCGGTGTGTTCGGAAACAACGCCCAGGAC
ACTGGTATCTCTCCTTCCGTCTGGCGATACTACCTGCTGTCTGCTCGACCTGAGTCCTCC
GACACCCAGTTTTCCTGGGACGACTTCGTGGCTCGAAACAACAGCGAGCTGCTTGCCAAC
CTCGGAAACTTTGTCAACCGAGTCATCAAGTTCTCCAACGCCAAATACAACGGTGTCGTT
GCCGACTTCTCTACTTCTGAGCTCGGCGACACCTTCACTCTTCTCAAGGCTGACGTTGAC
GGTCTGCTGACCAAGTACAACACCCTCATGGAGAACACCAAGCTCAAGTCCGCCCAGGAC
ACCGCTATGGCCATCTCTTCTCGAGGTAACCAGTTCCTGCAGGATAATAAACTCGACAAC
TCTCTGTTTGCCGACCACCCTGCCAAGTCTGCTGCCGTTGTGGGTGTGGCTCTTAACCTG
ATCCACCTTGTCTCTGCCGTCATTGCTCCCTTCATGCCCGAGACTGCCGAATCCATCGAC
AAGCAGCTTAACGCACCCGCTCGACGAATTCCCGACGAGTTCACCATCGACATCCTTGGT
GGCCATCACATTGGCAAGGCTGCTTACCTGTTCAAGCGAATTGACGAGAAGCAGATTGAG
GAGTGGAGAAACAAGTTCGGAGGCCAACAGTAAGGCCGGGGTGAACACATATCCAAATCT
CAGGTCACTGGAAGTAAAAAAACTCGCCATGTGTACGAAAATGAGATAGAGTAAAAAAAT
GTTGAATATACACACTGAAATAATACATATGGATTCTCTTTATAGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F29843g_CDS-001

Protein length: 751 aa.
Product: Methionyl-tRNA synthetase, putative

>YALI0F29843g_CDS-001 MSKLHIPTQAGGPVGVSGVVKTVAAVLKFAPKTPIVEDDNITVPFLEVGSTNLIEPNSVV
RYLAGAKETVESNLLKYEQETIYRLLTGQAQTSLDESILKLSTITSGSAEEIIVFGSLFA
LNEKSGEAGKWVDERLASNETLAQAITRVKVKKAKKAVAAPVDLPLNTGEQNLSESFDAK
KSSSEVIKPVPGQRNILITSALPYVNNVPHLGNIIGSVLSADVYSRYCKGRNYNALFICG
TDEYGTATETKALEEKVTPKELCDKYHKIHKDVYDWFQIGFDYFGRTTTDKQTEIAQDIF
MKLHDNGYLEAQKMTQLYCTQHNAFLADRFVEGICPKCGYEDARGDQCDGCGTLLNPFEL
IKPRCKLDGSSPEVRDSEHIFLSLDKLQKETVEWAQESAEKGDWSKNSRTITDGWLNNEL
HPRCITRDLVWGTPVPLEGFKNKVLYVWFDATIGYVSITANYSPENWKAWWNNPENVDLY
QFMGKDNVPFHTVIFPATLLGTKQPWTKLHHLSTTEYLQYEGGKFSKSRGVGVFGNNAQD
TGISPSVWRYYLLSARPESSDTQFSWDDFVARNNSELLANLGNFVNRVIKFSNAKYNGVV
ADFSTSELGDTFTLLKADVDGLLTKYNTLMENTKLKSAQDTAMAISSRGNQFLQDNKLDN
SLFADHPAKSAAVVGVALNLIHLVSAVIAPFMPETAESIDKQLNAPARRIPDEFTIDILG
GHHIGKAAYLFKRIDEKQIEEWRNKFGGQQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG