YALI0F27181g

Overview

Description similar to uniprot|P36017 Saccharomyces cerevisiae YOR089C (ohnolog of YNL093W) VPS21 GTP-binding protein
Locus type CDS
Locus tag YALI0F27181g

Location

Species Yarrowia lipolytica Positions 3452376..3453232
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 857 (nuc.)
Previous locus YALI0F27159g Next locus YALI0F27203g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F27181g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F27181gYALI0F27181g_mRNA-001YALI0F27181g_CDS-001

Nucleotide sequence

 

>YALI0F27181g
ATGGCCACCCCAAGAACGTCTTCTCAAGAGCGATTTGCACAGTTCAAACTCGTGTTATTA
GGTGAGTGAGAGAGGGTCTATGCTACTCTCTTCTGGCTTCTTTCAGCGACTCCACCACAA
GAAGAAAATGGGAATGGAGCAAAGCATCTTTGGTGTGATCTTTGGGTACAAGAAAGGGTG
CAAGCTAGGTCAGATTCGTATCAGAACCGCTTTGCCTGTCACTTGCTTGATGTTACTAAC
ACAGGTGAATCGTTTGTGGGTAAATCCTCGCTGGTGACCCGGTTCGTCAAGGACGAGTTT
CTCGAGCAGAGAGAATCAACTATCGGAGCAGCCTTCCTGACCCAGACTGTCTCTCTGGAA
GACAACAAGACAGTCCGGTTCGAGATTTGGGATACTGCCGGACAGGAGCGATACAAGTCG
CTGGCCCCCATGTACTACCGGAACGCCAATTGTGCTGTGGTGGTCTATGACATTACACAG
GCCTCGTCATTGGAGCGATCTAAGGCATGGGTCAAGGAGCTCCAGCACCGAGCTGCTGAC
GGAATCATTATTGGCCTTGCCGGAAATAAGCTGGATTTGGAGGACAAGCGAGAGGTGCCT
ACAGAGGAGGCTCGAGCTTACGCCGAGGAGGCTGGTCTTCTGTTCTTTGAGACCTCGGCC
CTGACAGGAGAGAATGTGCTGGAGCTGTTTACAGAAATCGCACGAAAAGTGCCATTCGAG
AACTCCACCGCAAGACCCAGAATGAGCGCCAAGGGAGTGGACCTCAATAAGAACGGAGGA
ACCGAAGCCCAAGGCTGTAATTGTTAAGAAGACGTACGTAAACAGTAGTTAATGCATAGT
AATGAAATAATGAGATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F27181g_CDS-001

Protein length: 208 aa.
Product: Endosomal Rab family GTPase, putative

>YALI0F27181g_CDS-001 MATPRTSSQERFAQFKLVLLGESFVGKSSLVTRFVKDEFLEQRESTIGAAFLTQTVSLED
NKTVRFEIWDTAGQERYKSLAPMYYRNANCAVVVYDITQASSLERSKAWVKELQHRAADG
IIIGLAGNKLDLEDKREVPTEEARAYAEEAGLLFFETSALTGENVLELFTEIARKVPFEN
STARPRMSAKGVDLNKNGGTEAQGCNC*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG