YALI0F27203g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F27203g

Location

Species Yarrowia lipolytica Positions 3454559..3456463
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1905 (nuc.)
Previous locus YALI0F27181g Next locus YALI0F27225g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F27203g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F27203gYALI0F27203g_mRNA-001YALI0F27203g_CDS-001

Nucleotide sequence

 

>YALI0F27203g
ATGAACCTCAGAACTGTTGAAACCAGGGGCTCAGGGCTAACTGCAGTGCCCCGCCGTACA
ATCAACCCCAGCGTCAACGAGCTGCTACTATCGACTCAGATTCCCATCGGACGAAGACGG
AAGAAGAGCAAAAAGAAAACCTCACATTTGGACACCGCAGGGAGTGACGGAGATGGAGAT
GATGAGACGTATCACAAGAACGCACGAAAGGTGTCTTCGACCTCCACCGTGTCCACCACT
CAAAGCCTCAACAAGCCTGCTGACACAACGGAAATCGTCCGTGGTGCTACACATCTTACT
CCCTCGGGGTCTCATGTGACTATCATGGAGCGTGAGAACCCTTATGTCATGGGCACGGGC
ATCACTCTGGGTCGTCTTTCCATCACCCCACCTCATTTGTCTATGGTGTATTCATCAGAA
TCAAACGATAATGACGACGACGACGAGTACGAGTCCTTGTTTGGCCAGACATACAATGAC
ACAAACGGCCTCCTGCAGCGACTCTCTGGACTGGCTCGGGACTCCCAGACACCTTATTAT
GCCACGAGCCCTCCTGACGACATGTTCGCTAGTTCCATTAGCTCAGCCAGCAGCATCGAC
TATGACCCTGCCTTGGCCACTAGCGCTGTCACTGACAATGCCACCGCCACTGCCACCAAC
GAAGATGACACCAACGTGGCTACCAACACAAACACTAGCGACACAAATGGCGTCACTACT
ATCAGAAACAACACTGTACCTGTGCTTGCTACGTCAGCTGGCACTGCCGTACCCTCTACT
AACAACAACTTCCCCGGGACCATGTCTGCTGCTGCCTCCAGCCGTGCTCTTTCCCGTTTA
CCCAAACGGCGAACTTCTCTGCTGTCCTTCTCGAGCAAGAACTCATCCTCGTCGCGACAG
GTGACATGTGCATGTCCCATTCCCGTGTCGGACCATCCTCTTTCTGAGTTTGGGGACGAC
TCCGAATTTGGAGACGAGTCGGACGCCCCCTCTCTGGGCTTCCCCCGCACAGAATCGTTT
GCCTCTTTCACCGATGATGATGACATGAGCGGGGTGGACTACGTCTATCCTAAGAAGGCC
GCATCCATTGCATCACACGATAGCGGCTCTGTAGTGGGTACTGCTACTGCCGACGATGGA
ACTCTTTCAACCGCCGATGCCTCTGCTGCCTCTGCTGCAGCTGCGGTGGCTACCACTTCG
ACCTCCACGCGGTCCAAACTGGTGTCCAACATCACCAAGTCTTTCAAGGCCTTCAGCAAC
GCCGCCAGCAAGTTCTCCACGTCTCAGCAGGCCCAGGTGAGTTCCAACTCGGCGTTGTTT
GCATTTTCTCCCCGATCCACAGATGAGTGTATGGTTATGACTGACGAGCTGAACCAAGCT
GCGGCTGCGGCTGCTGCCGACAACGCTGGTTGTACTCACGAGGAAGCTGCTACTGCCACT
TCTACCTCCACTGCTTCTCCCAGAAACATTCCTCTCAAGACATACAACTACAGCTCTACT
CTTTTGCCTGTGGTTCGCCCCCGAGAGCACCGGATGAACCCCGACTTTCTGAGGGTGTAT
GCTTCCGAGGCTCTCATGCGGCAGCGTGGCAAGCTGGACCCCGATTTTGTGGGTCGAGCC
ACCATGCTGCTGCCGCCTCGAACCGACAATCCCGACTCCTTCTACCGCCTTAAGGCTGGA
ATTGATGGAGAGTGGGAAAAGGTTTTTGGCATTCGTAAGCGGTTTGTGACAAAGTTCGAC
GACAAGCGATGCATTACGACCCAGAAACAGGTGCCTGCGAGATGGGTTCCTATTAACTGG
GACGATTGTGAAAATTGTGAAGGTGACGTAGACGAGGATGCACTAGAAACCTCGGTCACC
CATGAAACATAGTATTTATTTATTTATTGCATTTTTATCTACAAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F27203g_CDS-001

Protein length: 624 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F27203g_CDS-001 MNLRTVETRGSGLTAVPRRTINPSVNELLLSTQIPIGRRRKKSKKKTSHLDTAGSDGDGD
DETYHKNARKVSSTSTVSTTQSLNKPADTTEIVRGATHLTPSGSHVTIMERENPYVMGTG
ITLGRLSITPPHLSMVYSSESNDNDDDDEYESLFGQTYNDTNGLLQRLSGLARDSQTPYY
ATSPPDDMFASSISSASSIDYDPALATSAVTDNATATATNEDDTNVATNTNTSDTNGVTT
IRNNTVPVLATSAGTAVPSTNNNFPGTMSAAASSRALSRLPKRRTSLLSFSSKNSSSSRQ
VTCACPIPVSDHPLSEFGDDSEFGDESDAPSLGFPRTESFASFTDDDDMSGVDYVYPKKA
ASIASHDSGSVVGTATADDGTLSTADASAASAAAAVATTSTSTRSKLVSNITKSFKAFSN
AASKFSTSQQAQVSSNSALFAFSPRSTDECMVMTDELNQAAAAAAADNAGCTHEEAATAT
STSTASPRNIPLKTYNYSSTLLPVVRPREHRMNPDFLRVYASEALMRQRGKLDPDFVGRA
TMLLPPRTDNPDSFYRLKAGIDGEWEKVFGIRKRFVTKFDDKRCITTQKQVPARWVPINW
DDCENCEGDVDEDALETSVTHET*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG