YALI0F27159g

Overview

Description some similarities with uniprot|P47042 Saccharomyces cerevisiae YJL057c IKS1 probable serine/threonine-protein kinase
Locus type CDS
Locus tag YALI0F27159g

Location

Species Yarrowia lipolytica Positions 3450542..3452404
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1863 (nuc.)
Previous locus YALI0F27115r Next locus YALI0F27181g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F27159g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F27159gYALI0F27159g_mRNA-001YALI0F27159g_CDS-001

Nucleotide sequence

 

>YALI0F27159g
ATGCCTCCTCTTCAGATTGTATTGGACAATGCGTACCAGCGTGCCTTAGTATTGTACGAC
GAAAGATCTAGGCAGGTGGAGCTGATTCACGATGAAGAGCAGTATTTACAGCTGCGATCT
AGCACACCACAGAGATCACAGAGTCCATTCTCAGCTGGTAACAACAGAGAAGGTCAGCTT
ATTGTAGGAAAGCCGAAACGACCTTCGGTTTCCCCACCACGACGCCACTCTGAAACTTAT
TGTGTGACATGCGGATCCAAGCTTCCAAGTGGATTCAGACAGCGACCAACTGCTTCAGCG
AACGACTTCGTTGATCGCAACTACTTCCAACTTCTGGCAGGAGACTTACAACAAAATCAT
CTGGGCTCCAACACCAATGCCACGGGGAGAGCTAAGAATGGCACCTTTTCAAACCCGGTG
TACAATAGCATTTCTGAAAATGCGTTCCTGCAGGGTTACTTTGACAAGTTCTTTGAACTG
AAACACGAATTAGGCCGAGGAGGACGAGGAACAGTGTGGTTGGTGGAACATGTTCTCAAT
GGGGTTTCGCTGGGATTGTTTGCATGCAAAAAAGTGCCAGTTGGTGATGACACGGTGTGG
CTGACAAAAGCTCTGTACGAAGTGACATTGCTGAAACAGTTGAACCACCCAAATCTCATC
CGATACAACCATGTTTGGTTAGAGACATCTCAATGGTCTCCATTTGGTCCAGCTGTCCCC
TGTGCATTCATTCTTCAAGAGTATTGCTCAGGAGGCAACCTTGAGGTCTATGTAAAGAAG
AGACGAACTCTGACTCCGTTCGAGGTTGTGAGCTTCTTAAAAGATATATTGTCTGGTGTT
TCCTACTTACATGAACATCAGATTATCCATCGAGATCTCAAGCCCTCCAACTTCCTACTC
AAGGATGAAGGAAACGGACCTGGAACTCCCCCGCAGATTCTGGTGAGTGACTTTGGAGAG
GGAAATGTCGAAGGCCAGCATAGATCAAGTACAGGAACCACAGGAACATTGGAATACTGC
GCCCCAGAACTACTCTCGCGTGACATAAGAGGAAACCTCGGGGAGTTCTCACGGCATTCA
GACATGTTCTCCGTGGGATTGGTTTTGTACTTCCTGTGCTTTGGTCACACGCCATACAGA
TCCCCTCGTGGAGTTGACAGTGGTGCAGTGAACTTTGAATCATTGAGAGAGGAAATATGT
ACGTTCCCGGGATATGAAGATGGTGAAGAACAACCAAACTTCCCTATTCCCACTGATCTA
CAGACTTTGTTGACCTCGTGGTTATCCACCATTCCTGAAGAGCGCATCAGTGCCAAAGAT
GCTCTGTTTTTGCTCGAGAACATGGACATGAGCACCATCACCGTCGACACGACTCTGACG
ACACGAAGACTGTCTATCAAGCCAGTGGTCCCGGATAGTGAAGATGAAGATGAGGAGCTA
ATTGGACAGGACTTCTCCGGTGAATTTCTGCCGGAAATACTCAGTTTGAGAGGAGCTGAG
AAGCAACGAAAAGCACAGGAGAACAGGGTCATCAAGTATGGCATCAAGGGCTGTCTTCTG
GCAACGAAGATAGCCACTATCGAGAAGGACAAGGACATGAGTCCTGTTTTGAGGCAGATG
TTAATTCTGCTCATAGGTTTGGAGTTGCCTCTTAGCGCTCAAATGTCAGTTGCATTATTT
GGGCTTCACATGGTTCTCATGTTGGTTGGTTACTACGGTTTTCTGTAAATTGACGGCTCT
ACTGACATGGTGATACACATGGTTTTGTGTCCCAGACATTAGCTACTGGTAACTGGCTCA
CCTCCACATACATAGCTACTCTGCACACATCATCAATCTCATTATTTCATTACTATGCAT
TAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F27159g_CDS-001

Protein length: 576 aa.
Product: Conserved hypothetical protein

>YALI0F27159g_CDS-001 MPPLQIVLDNAYQRALVLYDERSRQVELIHDEEQYLQLRSSTPQRSQSPFSAGNNREGQL
IVGKPKRPSVSPPRRHSETYCVTCGSKLPSGFRQRPTASANDFVDRNYFQLLAGDLQQNH
LGSNTNATGRAKNGTFSNPVYNSISENAFLQGYFDKFFELKHELGRGGRGTVWLVEHVLN
GVSLGLFACKKVPVGDDTVWLTKALYEVTLLKQLNHPNLIRYNHVWLETSQWSPFGPAVP
CAFILQEYCSGGNLEVYVKKRRTLTPFEVVSFLKDILSGVSYLHEHQIIHRDLKPSNFLL
KDEGNGPGTPPQILVSDFGEGNVEGQHRSSTGTTGTLEYCAPELLSRDIRGNLGEFSRHS
DMFSVGLVLYFLCFGHTPYRSPRGVDSGAVNFESLREEICTFPGYEDGEEQPNFPIPTDL
QTLLTSWLSTIPEERISAKDALFLLENMDMSTITVDTTLTTRRLSIKPVVPDSEDEDEEL
IGQDFSGEFLPEILSLRGAEKQRKAQENRVIKYGIKGCLLATKIATIEKDKDMSPVLRQM
LILLIGLELPLSAQMSVALFGLHMVLMLVGYYGFL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG