YALI0F25025g

Overview

Description similar to uniprot|O59760 Schizosaccharomyces pombe haloacid dehalogenase-like hydrolase
Locus type CDS
Locus tag YALI0F25025g

Location

Species Yarrowia lipolytica Positions 3235312..3236271
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 960 (nuc.)
Previous locus YALI0F25003g Next locus YALI0F25047g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F25025g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F25025gYALI0F25025g_mRNA-001YALI0F25025g_CDS-001

Nucleotide sequence

 

>YALI0F25025g
ATGACCATGAAGTGAGTACCGAACGACAATGGCCATGAAAGAGCTTCGATTAACACAGCA
TCCGCGCTTGCCTCTTCGACATGGATGGTCTACTCATCAACTCTGAGCAGATCTACACCG
ATGTTGCCAACGAGATTTTAGCCGAACACGGTAAAGGTCCTCTTCCCTGGGAGATCAAGA
AGGACCTGCAGGGCCGACCTGGTCCTGAGGCCGCGCGAGTCTTCCTTGAATGGTCTGGAT
TGCCCTACAACCCCGACGAGTATTACGCCATGACCTCTGCTCGTCAGTCGGAAAAGTGGC
AGACCTGCAAGTTCATGCCCGGAGCTCTGGAGCTGCTGAAGTACCTCAAGGAGAAGGACA
TTCCTTTTGCTCTGGCCACCTCATCCCACCGAGGAAACTTTGAGAAGAAGACCGCCCACC
TGGGTCACGGATTCGAGCTCTTTGGCGACCACATTGTCGTTGGAGATGACGAGCGAATCC
CCAAGGGTCGTGGCAAGCCCAACCCCGACATCTGGCAAGTGGCTCTCAAGTCTCTGAACG
ACCAGAGACACGCCGGTGACCAGATCAAGCCCAATGAGGTGCTGGTGTTCGAGGACGGCA
TTCCCGGCGTTGTTTCCGGACGAGCTGCTGAGGCCCATGTTATTTGGGTGCCCGATCAGC
GCCTTCTCAACGTGCTCAAGAAGGGCGAGGCCCAGGAGATCATTGGCAACCAAGGCGAGA
TTCTCACCTCTCTCGCCGATCTCGACAAGACCAAGTATGGCCTTTAATTGGATCTATGTA
AATCAACATCAATACGCTTTAGGCAAGCTTTTAAATCAGACATGAACCATACTGTACCTC
TAGATCAGCATGAAGCATAGACCACCCTAACTCATTGTTGCAAGACCACTAAACTAATAG
CTGTATTTGTGCCGCCCGGCCCCTCACTCACTCTTCTATAAATACATTCTCTACAAAGGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F25025g_CDS-001

Protein length: 240 aa.
Product: Haloacid dehalogenase-like hydrolase, putative

>YALI0F25025g_CDS-001 MTMNIRACLFDMDGLLINSEQIYTDVANEILAEHGKGPLPWEIKKDLQGRPGPEAARVFL
EWSGLPYNPDEYYAMTSARQSEKWQTCKFMPGALELLKYLKEKDIPFALATSSHRGNFEK
KTAHLGHGFELFGDHIVVGDDERIPKGRGKPNPDIWQVALKSLNDQRHAGDQIKPNEVLV
FEDGIPGVVSGRAAEAHVIWVPDQRLLNVLKKGEAQEIIGNQGEILTSLADLDKTKYGL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG