YALI0F25047g

Overview

Description highly similar to uniprot|P38689 Saccharomyces cerevisiae YHL011c PRS3 ribose-phosphate pyrophosphokinase
Locus type CDS
Locus tag YALI0F25047g

Location

Species Yarrowia lipolytica Positions 3236199..3237684
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1486 (nuc.)
Previous locus YALI0F25025g Next locus YALI0F25069g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F25047g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F25047gYALI0F25047g_mRNA-001YALI0F25047g_CDS-001

Nucleotide sequence

 

>YALI0F25047g
ATGACTTCCAACTCCATCAAGATTCTGTCCGGTGATATCAACCAGGGCTTGGCTGAGAAA
GTTGCTGCTAGGTGAGTTTGTGCCGAGAAGACGGGATGAGTCAGCCGGTGAGCTCCGACA
ACGACAGTGTTACTCAAGTCACAAGACAGAAGAGGAGAGACACCGACACACCAGAAGATG
CAAAGCGACACAGAAGACAGGTTTTATCGATTCCCGCTTTCATTATTGAACGGTTGCGGA
CTAATCTATACGGTCACCGAGAACGACATATGGGGAGCATGTGAATATAAGCAGTTCTTT
GGCCTCGTGGACAGGTGAAGTTCAGTGTTCATGTGACGGCAATCTGTTTGCTGCACCCTT
GTCCTCCGATTGCGAATTACTGTATCTGTTTCAGAATCATGCGTCTTGTTCCTCTTGCAT
GGCTCTCCGTTATTCTCTTCTGACCTGGCATAGATCGTTGAGCGTCCGTGACCTACAGCC
ACTCACTTCCTTGTGCTAACCCAGACTCGGCCTCCCCCTGGCCAAAATCAACATTTTCCG
AGACTCCAACCGAGAAACTTCCATCACCATTGGAGAGTCGGTTCGAGACGAGGATGTGTA
CATCATCTGCCAGGTGGGCTGCGGCGAGGTCAATGACCGTATCTTGGAGATGCTAATCAT
GATCAACGCCTGCAAGACCGCCTCGGCCCGGCGAATCACCGCTGTTCTCCCCAACTTTGC
CTACGCGCGTCAGGACCGAAAGGACAAGTCTCGAGCCCCCATCACCGCCAAGCTCATGGC
CAACATGCTTCAGACTGCTGGATGCAACCATGTCATCACCATGGACCTGCATGCTTCTCA
GATCCAGGGCTTCTTCGACGTACCTGTGGATAACCTCTACGCCGAGCCCTCGGTGGTCAA
CTACCTCAAGTCCGAGATCATGCATAACGTCAATGGCCAGCCCGGAGACCACACAAACAC
CATCATTGTGTCGCCGGATGCCGGTGGAGCCAAGCGAGCCGCTGCTCTTGCCGACCGTCT
GGATCTCAACTTTGCTCTGATCCACAAGGAGCGGGCTCGAGCTAACGAGGTCAGCCGTAT
GGTGCTGGTTGGAGACGTCAAGGATAAGGTGTGTGTGCTTGTCGACGATATGGCCGATAC
TTGTGGTACTCTGGCCAAGGCTGCCGATACTCTATTTGAGCACGGCGCTATCAAGGTGAT
TGCCATTGTCACCCACGGCATTCTGTCTGGCCGAGCCATTGAGATCATCAACAACTCCAA
GCTCGACCGAGTCGTGTGCACCAACACTCTGGATCTGCAAACCAAAATGGACCAGTGTCC
CAAGCTCGGCATCATTGACATTTCCGGCGTGCTGGCAGAGAGTATCCGACGTCTTCACAA
CGGAGAGTCCGTCAGCTATTTGTTTAGAAACGTTCCTTTGTAGAGAATGTATTTATAGAA
GAGTGAGTGAGGGGCCGGGCGGCACAAATACAGCTATTAGTTTAGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F25047g_CDS-001

Protein length: 330 aa.
Product: Ribose-phosphate pyrophosphokinase, putative

>YALI0F25047g_CDS-001 MTSNSIKILSGDINQGLAEKVAARLGLPLAKINIFRDSNRETSITIGESVRDEDVYIICQ
VGCGEVNDRILEMLIMINACKTASARRITAVLPNFAYARQDRKDKSRAPITAKLMANMLQ
TAGCNHVITMDLHASQIQGFFDVPVDNLYAEPSVVNYLKSEIMHNVNGQPGDHTNTIIVS
PDAGGAKRAAALADRLDLNFALIHKERARANEVSRMVLVGDVKDKVCVLVDDMADTCGTL
AKAADTLFEHGAIKVIAIVTHGILSGRAIEIINNSKLDRVVCTNTLDLQTKMDQCPKLGI
IDISGVLAESIRRLHNGESVSYLFRNVPL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG