YALI0F25003g

Overview

Description weakly similar to uniprot|P35183 Saccharomyces cerevisiae YBL069W (ohnolog of YER101C) AST1 Lipid raft associated protein that interacts with the plasma membrane ATPase Pma1p and has a role in its targeting to the plasma membrane
Locus type CDS
Locus tag YALI0F25003g

Location

Species Yarrowia lipolytica Positions 3233824..3235113
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1290 (nuc.)
Previous locus YALI0F24981g Next locus YALI0F25025g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F25003g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F25003gYALI0F25003g_mRNA-001YALI0F25003g_CDS-001

Nucleotide sequence

 

>YALI0F25003g
ATGGAAACCCTAGCAAATTGGCTTCTACCCGACACCCCCAAGCCTCTGGACATCAAGCAA
CTGACTTTTGGCCGACCTGGGGGAAACAAGGGCTTCACCTTCTCCACCATCCCTCTGCCC
CTCAAGACCAATGAGGTACTTATTGAGGTGAAGGCGGCCTCACTCAATCCATGGGACCTC
AAGGTGTGGAAGCAGCCCCAGACTTGGCTCAAGGAAGAGCATGGCTTGGGCCAGGATTTC
TCCGGTATCATCAGCGATCTGGGCCAGGGAGCTGCGTCAAAGGGCTGGAAGGTTGGCGAT
CGTGTCTGTGGTCTCAAACTTCACTACGGTAGTCAGGGAACCATTGCGTCCCACATTGTT
ATTGACCTCAACAAGACCAAGTACTCTATGACCCACATTCCCGACAACATGACTTTCGAG
GAGGCCGCAGCGTTCCCACTCGTGTTTGGAGCCGCCTGGGAGGGCCTGTCACATTGCCCA
ATGCAGGCGATTAGAGATCAGACCCTCAACGTCTGTATTCTGGGAGGAGGAACAGCCGTG
GGCCAGATGGCCATCCAGCTGGCCAAGAACCACCTGCGAGCCAAGCACGTGGTGTGCACC
ACAGCCGGCGGCGAGTCGGAGGAGATTGCACGTGATCTCGGTGCAGACCATGTTATCGAT
TACAAGGCTGCCGGAAACGTCGGAGACGCCATTGAGTACATTGTCGGCAACCAGGAGCTA
GACGATACCAACGACCAGCACAGGGTGCGGTTTGCAAACTCGTACTCCACTAATGGCGAG
AAATTTGACGTGATCCTCGACTGCGCCGGAGGTGCTGGAGCTGGAGACGTGCTGGCGAAG
GCCAAGTCGCTTCTCAAGCCCTACAATGAGGGATCCGCCTTTGTCACCCTTGTGGGAGAC
TACAATACCCCCAAGGTCAATGCCTCGGTTGTCCACGGCTCCAATGGTCCCTCTCCTCTC
ATTTCCAAGTCCATCTCCACATATGACTCCGCTTCATATTGGTACGGAGGCTGGACTCAT
AAGCTGGCTTTCCAGACCGGCTCTTCAGGTTTTAGATACATCACCGCCAATGTCAAGGGC
TCTGGTGACTGGATCAACCAAGCCCACGCTGGCTTCGCATCCAACTCTATCAAGGTGCGA
ATTGACACGGTATACCCCTGGACCAAGTACGACGACGCCTTTGAGCAGCTCCTGAGCCGA
AAGGTCAAGGGCAAAATTGTTCTGCGAATCCAGGACTTTTAATGGGATAATGGTAATATA
TAATAATATAATGGATGTGCATATGGTGAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F25003g_CDS-001

Protein length: 414 aa.
Product: Conserved hypothetical protein

>YALI0F25003g_CDS-001 METLANWLLPDTPKPLDIKQLTFGRPGGNKGFTFSTIPLPLKTNEVLIEVKAASLNPWDL
KVWKQPQTWLKEEHGLGQDFSGIISDLGQGAASKGWKVGDRVCGLKLHYGSQGTIASHIV
IDLNKTKYSMTHIPDNMTFEEAAAFPLVFGAAWEGLSHCPMQAIRDQTLNVCILGGGTAV
GQMAIQLAKNHLRAKHVVCTTAGGESEEIARDLGADHVIDYKAAGNVGDAIEYIVGNQEL
DDTNDQHRVRFANSYSTNGEKFDVILDCAGGAGAGDVLAKAKSLLKPYNEGSAFVTLVGD
YNTPKVNASVVHGSNGPSPLISKSISTYDSASYWYGGWTHKLAFQTGSSGFRYITANVKG
SGDWINQAHAGFASNSIKVRIDTVYPWTKYDDAFEQLLSRKVKGKIVLRIQDF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG