YALI0F24981g

Overview

Description highly similar to uniprot|Q3E840 Saccharomyces cerevisiae YBL071w-a KTI11 Zn-ribbon protein that co- purifies with Dph1 and Dph2; in a complex required for synthesis of diphthamide on translation factor eEF2 and with Elongator subunits Iki3p, Elp2p, and Elp3p; involved in modification of wobble nucleosides in tRNAs
Locus type CDS
Locus tag YALI0F24981g

Location

Species Yarrowia lipolytica Positions 3231998..3232501
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 504 (nuc.)
Previous locus YALI0F24959g Next locus YALI0F25003g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F24981g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F24981gYALI0F24981g_mRNA-001YALI0F24981g_CDS-001

Nucleotide sequence

 

>YALI0F24981g
ATGTCTTTCTACGACGAAATCGAAATCGAAGACATGATCTTCGACGCGGATCAGGGTATC
TTAACGTATCCTTGTCCGTGTGGCGACAAGTTCCAGATTGCCCTGGACGACCTCAAGGAT
GGCGAAGAGGTAGCCGTCTGTCCCTCGTGCAGTCTCATGATCAAGGTCATTTTCGACCCC
GAGGACCTTGAGCAGTTTGAAGAATCGTGACGAAGAGGTGCTCTATAGCACTAGTCAAAA
TTCAGATTATGACTGGAAACTGTCATACACGACACCCTCACTATGAACTGTTCTGTCACG
ACTTCTACGACATATGCCATGGGCCCCCTCCACACACTCTCAAACACACACACACACACA
CACACACACACACACACACACACACCATACACATACATACATTCAGGTCACGCGGACTAC
TCACATATCCGTGTGACAAGGTAAGAAGCAATCGTTGTGTCTTGGTCCACATATCTATTT
ATTCACTAATGGAAAAAGAAGCAA

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F24981g_CDS-001

Protein length: 70 aa.
Product: Diphthamide biosynthesis protein 3, putative

>YALI0F24981g_CDS-001 MSFYDEIEIEDMIFDADQGILTYPCPCGDKFQIALDDLKDGEEVAVCPSCSLMIKVIFDP
EDLEQFEES*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG