YALI0F24959g

Overview

Description similar to uniprot|P0CX40 Saccharomyces cerevisiae YER102W (ohnolog of YBL072C) RPS8B ribosomal protein
Locus type CDS
Locus tag YALI0F24959g

Location

Species Yarrowia lipolytica Positions 3230652..3231345
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 694 (nuc.)
Previous locus YALI0F24937g Next locus YALI0F24981g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F24959g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F24959gYALI0F24959g_mRNA-001YALI0F24959g_CDS-001

Nucleotide sequence

 

>YALI0F24959g
ATGGGTATTTCTCGAGACTCCCGACACAAGCGATCCCACACCGGCGCCAAGCGTGTCTCC
ATCCACAAGAAGCGAAAGTTCGAGTGCGGTCGACAGGGTGCCGTCACCCGAATCGGCCCC
AAGCGAATCCACACCGTCCGAACCCGTGGTGGTAACAAGAAGTTCCGAGCCATCCGAATC
GAGACCGGCAACTTCTCCTGGGGCTCTGAGGGAACCACCCGAAAGACCCGAGTCCTCGGT
GTCTCTTTCCACCCCTCCAACAACGAGCTTATCCGAACCAACACTCTGACCAAGTCTGCC
ATTGTCCAGATTGATGCCACTCCTTTCCGACAGTGGTACGAGTCCTACTACGGCAAGTCT
CTCGGCAAGAAGAAGGCTGGCCAGGAGGAGCCCGTCATTGCTGAGGCTGACCAGGCTGCC
GTTGCTGCCCGACAGGCTGATGCCAAGCTCGACCCCGCCGTCGAGGCTCAGTTCGGTGCT
GGCCGACTCTACGCCTGCGTTTCTTCTCGACCCGGTCAGTCCGGCCGAGTTGACGGTTAC
GTTCTCGAGGGAGAGGAGCTTGCTTTCTACCTCAAGAAGATTGTCTCCAAGAAGTAGACA
CAAAACTAAAATGTATTATTGCACGTGAAAATGAACTGAGATGGGTTCAAATACCGCAGG
TGTTTGTACGTTGTAGATAGTAGTACTTGTTGTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F24959g_CDS-001

Protein length: 199 aa.
Product: Ribosomal 40S subunit protein S8, putative

>YALI0F24959g_CDS-001 MGISRDSRHKRSHTGAKRVSIHKKRKFECGRQGAVTRIGPKRIHTVRTRGGNKKFRAIRI
ETGNFSWGSEGTTRKTRVLGVSFHPSNNELIRTNTLTKSAIVQIDATPFRQWYESYYGKS
LGKKKAGQEEPVIAEADQAAVAARQADAKLDPAVEAQFGAGRLYACVSSRPGQSGRVDGY
VLEGEELAFYLKKIVSKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG