YALI0F23397g

Overview

Description similar to uniprot|P40340 Saccharomyces cerevisiae YGR270w YTA7 26S proteasome subunit; similar to uniprot|P40340 Saccharomyces cerevisiae YGR270w YTA7 26S proteasome subunit
Locus type CDS
Locus tag YALI0F23397g

Location

Species Yarrowia lipolytica Positions 3065642..3069706
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 4065 (nuc.)
Previous locus YALI0F23375g Next locus YALI0F23441g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F23397g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F23397gYALI0F23397g_mRNA-001YALI0F23397g_CDS-002YALI0F23397g_mRNA-002YALI0F23397g_CDS-001

Nucleotide sequence

 

>YALI0F23397g
ATGTCAACGCCTCGGACTGTGTGGCGCCGAAGAGGCGAGGAGTCGTCCAGCGAAGATGAC
TTTGACCTGACCCCACCCACCCGGAAGGCTGCCGCCAACAAAAACTACGTTGAGCCCAGC
AGCAGTGAAGAAGACGACCATATCCGACCCACGAGAGACAGCAACGACGACGACGACGAC
GACAACGCAAATGCCAGCCTACAAGCGCAGCTGGCGTTTGACGAAGACGAGGGAGTGGCC
GATTCGCAGGCCGATTCCGAAGAAGAGGGCTCTCGTCGGAAGCGCGGTCGAGCTGCAAGC
AGCGAGAATGGTAAGTCCGTTCCAGTCACACTTGCCATCGGGTGTCGATTAGCCCAGATG
ATGGAGAATGGAGGTGAGTGAACTACGTGACCAAATTACTACAGCAGAGATTCGCGACAC
ACTCGATGTCTCATGTCTCACATCTCATTAGGTACTAACACAGCTATTGGAAAACGCAGA
AAAGTGGAGGATGACTCCGACTTTGAGATTGAAGTAAAAAACGACGACTCGGACGGCGGA
TCGCCTTCGCCGGCTTCGGACTCGGACGATGTCAACTTTGGTTCTCGGGCTCGGAAGAAG
AAGGGAAGCAGACGCAAGGGCAGATCACACCATGCTACGGGAGGAAAGCGACCCAGACGC
GCTCGTTCACAGGTCCCCGACGACGATGAAGAATACAGCGCCAGTGATAACTCGTCGGAC
AACGAAGGCTCCAACGATTCTGGTGCTTCCGAGAGAGACGAGGATCCTATCAATAACTTT
GTGGAGGACGATGAAGAGGTGCAACCCGTGCGACGATCGAACCGACACAGAGGTCTGGGA
CGACGGGAACGAATCGCTATTGCTACTGCTGACGACGATGATGACGACGACAAGCGTCTG
TCATTGGCTGTTGAGCTGGCAGAACTGAGACGAAACGATCCCCCTCCAATCAGAAAGAAG
ACCCTGAGAGCTCGAAAGGCGGTCAACTACCAAATACTGCCCCCACCCACCGTGGACGAA
CCATTCAATGCAGATGAGGCAGGTGCTTCTGCTCCCACACGACGTCGAGGCAATAACAAT
GCTCTTCGACGTCTCATCCCTACAGTGGGACCCTTCGGCGGAGGCGACGTGATGCCTTTG
TTTGGAAACAACGTGCCTGGACTCACAGCTGTTGGTGGAGCCGACGATGACGACTCCAGT
GATGACGAAAAGATCAAGGGTATCCAGGGAGCTCCTGGCATTGCCAAGAAGAAGAACGCA
GTGGCAGACACGGATCCTCTGGGAGTGGACATGAACATTGACTTCACCCACGTCGGAGGT
CTCGACAACCACATCAACCAGCTAAAGGAAATGGTGATGCTGCCCATGATGTATCCTGAA
ATCTTCAAGCGGTTCAATACCACTCCCCCGCGAGGTGTACTGTTCCATGGTCCACCAGGA
ACCGGTAAGACCCTTCTGGCAAGAGCTCTCGCTGCGTCCTGCTCCACTGAAGGAAGAAAT
ATCACCTTCTTTATGCGAAAGGGAGCCGACTGTCTGTCTAAGTGGGTTGGCGAGGCTGAA
CGGCAACTGCGTCTCCTGTTCGAGGAGGCCAAAAATCAGCAGCCCAGTATCATCTTCTTC
GATGAGATTGACGGTCTTGCCCCTGTGCGATCGTCCAAGCAGGAGCAGATTCATGCCTCC
ATTGTGTCTACCATTCTGGCATTAATGGACGGTATGGATAACCGAGGCCAAGTGATTGTT
ATTGGAGCTACCAACCGTCCTGATTCAGTAGATCCTGCTCTCCGACGACCCGGTCGATTC
GATCGAGAGTTCTATTTCCCTCTGCCTGACAAGGAGGCGCGAAAGGCCATCATTGGAATC
CATACCAGCAAATGGTCCCCCCCTCTGCAACCGCAGTTTGTGGACCATGTCGCTGGTCTG
ACCAAAGGCTACGGAGGAGCCGATCTCAAGACTCTGTGCACCGAGTCTGCAATCAATGCC
ATTCAGAGAACATACCCTCAGATCTACTCTTCGCATGCCAAGCTCACGATAGACCCTGCC
ACAATTAATGTGCGAGCTGCTGATATTCTGTTGGCTGTCGACAAAATTGTGCCCTCTTCT
GCGCGATCCTCTTCTTCCGGGGCGACTCCTCTGCCTCCTACTGTGGCCCCTCTGCTTCAG
AACACCGTCGATGAGCTCAAGGACCGTCTGGACTCGATTGTTCCTCGAAAGAAGAAGCTG
ACAGCTTTGGAGGAGGCTCTGTTTGAAGAGTTCCCCGACGAGGACGGTGGGTTTGCACGA
ATTCAGCGACAGAAGCTGTTTGAGAAGTCGCGAACCTGCCGACCCAAGCTGCTCATCTCT
GGTGACACTGGTATGGGCCAGCAGTACATTGGCAGTGCTCTTTTGCATCATCTGGAGGGG
TTTCACATTCAGCAGCTGGACCTGGGATCTCTCTATGCCGATAGCAGTAGAACTGTCGAG
GCTACACTGGCTCAGATCATCACTGAAAGCAGACGTCATGCTCAGTCGGTGCTGTACATT
CCTAACATTGAGTTCTGGCCCACAACTCTCTCTTCTCAGGCACTGTCCATCTTCTACACT
CTGATGAGACAGGCGCAGAGCCAGACCGAGCTACTTGTTCTGGGTATCTCTGAAATGCCT
TATGAAGAGCTTCCCGGGGACTTGAAGTCTTTCTTTGGGGTAGCTGCTTCTCGCCTATAT
TCCATTCGAAAGCCCTCACTGTCAGAGCGACGAAAATATTTTGAGGGTATCGAGCAGTAC
ATTGTGGCCAAGCCTACAGACTACCCTGACCCTGCGACCCGAAAGAGACGAAAGCTCCCC
ATTCTGCCCGTTGCACCCCCGCCTCCGCCCAGGGAGTTGACTGCCTCCGATGTCAAGACG
CAGCAGAAGAAGGACATGCAGCTGAAGAACGTCATCAAGGTGAAGCTCAGTGGACTGATG
GAGCTGTTCAAAAATCGGTACAAGCGGTTCCGAAAGCCACCCATTGACGATATTCATGTT
GCTCATCTGTTCGAGCCTGAGATTGATCCCCAGGCTGCTGCTTTGCATGATTTCAGACGT
TCTGAGGACGACATGATTTTGCAGGTGTCCACTGGCAAGAAGTACTACAACTACGATCTC
GATGTGATCGAGGATCGGGTTTGGAATGGCTACTACTCGGAGCTCAAACAGTTCCTCAAG
GATATCGAGTACATCTACCTTGATTCCATCACCTCGGGCGACCGCGAGCGACGAAACAAG
GCATCGGAGATGTTTGCCAATGCCCAGGTGGCCATTGAGGAGATGAGCATCGACCAGCAG
TTCGTCGCTGACTGCAAGAAGATGCGACAACGAGAGATTGAGGCTCAGGAGAAGTGGAAG
ATTGAGCAAGAAAGAGTGGAGGCTGAGGAAGCCAAGGCGACCGCTGAACAATACGAGGCA
GAGGCCCGTCTTGCTGCTGAGGTACAAGAGCGAGAAGTGGATGGTGACGACGGAGATCCC
GATGTCAATCAGATGCAGGTCGACGGCGAGGGTATGATCGAGGAGGTCAAGGACGAGGAG
ATGGCTGACATTGACGCCGAAGATGAGAAGGTTGACAACAAGACAGAGGAAGTCGAAGTG
GCTGAACCCGTTGTCGCTAAACCTGCTGTGGTCGAGCGTGCTGTTCCCGACCCTGTTGTC
ACAGAGGTGACCGAGACGGCAACTATTGGAACCGAGCCCGCCATCAACGGACACGCCAAT
GGAACTGTCGTTGAGGAAGAGAACGTGGAGGCTGAAGTCCAGGTTGCACCTCCTGTGGAA
GCTTCTCCTTCTCCCCCTCCCACTCCTGATCCTCCTCTCATTGTAGACACCAAGAAGGCT
CAGGATGTGGTTGACTTCCTTGCTGGTAACACTGGCGAGCTCACTATCGAGGAGCTTGAG
CAGGTCTATGCCGCCATCATTGACATTATATGGGCACACCGAGCATCCTGGGACCGAAAT
GTCATAATCAACGCCATCACTGCCCAGCTGGACGAGATCGTCAATGCTTTCCACGAATAA
ACAAATAGACCTATATTAATTAATGACTACAGTATGAAATTGTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F23397g_CDS-002

Protein length: 1310 aa.
Product: Protein that localizes to chromatin, putative

>YALI0F23397g_CDS-002 MSTPRTVWRRRGEESSSEDDFDLTPPTRKAAANKNYVEPSSSEEDDHIRPTRDSNDDDDD
DNANASLQAQLAFDEDEGVADSQADSEEEGSRRKRGRAASSENGKSVPVTLAIGCRLAQM
MENGAIGKRRKVEDDSDFEIEVKNDDSDGGSPSPASDSDDVNFGSRARKKKGSRRKGRSH
HATGGKRPRRARSQVPDDDEEYSASDNSSDNEGSNDSGASERDEDPINNFVEDDEEVQPV
RRSNRHRGLGRRERIAIATADDDDDDDKRLSLAVELAELRRNDPPPIRKKTLRARKAVNY
QILPPPTVDEPFNADEAGASAPTRRRGNNNALRRLIPTVGPFGGGDVMPLFGNNVPGLTA
VGGADDDDSSDDEKIKGIQGAPGIAKKKNAVADTDPLGVDMNIDFTHVGGLDNHINQLKE
MVMLPMMYPEIFKRFNTTPPRGVLFHGPPGTGKTLLARALAASCSTEGRNITFFMRKGAD
CLSKWVGEAERQLRLLFEEAKNQQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTILALMD
GMDNRGQVIVIGATNRPDSVDPALRRPGRFDREFYFPLPDKEARKAIIGIHTSKWSPPLQ
PQFVDHVAGLTKGYGGADLKTLCTESAINAIQRTYPQIYSSHAKLTIDPATINVRAADIL
LAVDKIVPSSARSSSSGATPLPPTVAPLLQNTVDELKDRLDSIVPRKKKLTALEEALFEE
FPDEDGGFARIQRQKLFEKSRTCRPKLLISGDTGMGQQYIGSALLHHLEGFHIQQLDLGS
LYADSSRTVEATLAQIITESRRHAQSVLYIPNIEFWPTTLSSQALSIFYTLMRQAQSQTE
LLVLGISEMPYEELPGDLKSFFGVAASRLYSIRKPSLSERRKYFEGIEQYIVAKPTDYPD
PATRKRRKLPILPVAPPPPPRELTASDVKTQQKKDMQLKNVIKVKLSGLMELFKNRYKRF
RKPPIDDIHVAHLFEPEIDPQAAALHDFRRSEDDMILQVSTGKKYYNYDLDVIEDRVWNG
YYSELKQFLKDIEYIYLDSITSGDRERRNKASEMFANAQVAIEEMSIDQQFVADCKKMRQ
REIEAQEKWKIEQERVEAEEAKATAEQYEAEARLAAEVQEREVDGDDGDPDVNQMQVDGE
GMIEEVKDEEMADIDAEDEKVDNKTEEVEVAEPVVAKPAVVERAVPDPVVTEVTETATIG
TEPAINGHANGTVVEEENVEAEVQVAPPVEASPSPPPTPDPPLIVDTKKAQDVVDFLAGN
TGELTIEELEQVYAAIIDIIWAHRASWDRNVIINAITAQLDEIVNAFHE*

YALI0F23397g_CDS-001

Protein length: 1289 aa.
Product: Protein that localizes to chromatin, putative

>YALI0F23397g_CDS-001 MSTPRTVWRRRGEESSSEDDFDLTPPTRKAAANKNYVEPSSSEEDDHIRPTRDSNDDDDD
DNANASLQAQLAFDEDEGVADSQADSEEEGSRRKRGRAASSENAIGKRRKVEDDSDFEIE
VKNDDSDGGSPSPASDSDDVNFGSRARKKKGSRRKGRSHHATGGKRPRRARSQVPDDDEE
YSASDNSSDNEGSNDSGASERDEDPINNFVEDDEEVQPVRRSNRHRGLGRRERIAIATAD
DDDDDDKRLSLAVELAELRRNDPPPIRKKTLRARKAVNYQILPPPTVDEPFNADEAGASA
PTRRRGNNNALRRLIPTVGPFGGGDVMPLFGNNVPGLTAVGGADDDDSSDDEKIKGIQGA
PGIAKKKNAVADTDPLGVDMNIDFTHVGGLDNHINQLKEMVMLPMMYPEIFKRFNTTPPR
GVLFHGPPGTGKTLLARALAASCSTEGRNITFFMRKGADCLSKWVGEAERQLRLLFEEAK
NQQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTILALMDGMDNRGQVIVIGATNRPDSVD
PALRRPGRFDREFYFPLPDKEARKAIIGIHTSKWSPPLQPQFVDHVAGLTKGYGGADLKT
LCTESAINAIQRTYPQIYSSHAKLTIDPATINVRAADILLAVDKIVPSSARSSSSGATPL
PPTVAPLLQNTVDELKDRLDSIVPRKKKLTALEEALFEEFPDEDGGFARIQRQKLFEKSR
TCRPKLLISGDTGMGQQYIGSALLHHLEGFHIQQLDLGSLYADSSRTVEATLAQIITESR
RHAQSVLYIPNIEFWPTTLSSQALSIFYTLMRQAQSQTELLVLGISEMPYEELPGDLKSF
FGVAASRLYSIRKPSLSERRKYFEGIEQYIVAKPTDYPDPATRKRRKLPILPVAPPPPPR
ELTASDVKTQQKKDMQLKNVIKVKLSGLMELFKNRYKRFRKPPIDDIHVAHLFEPEIDPQ
AAALHDFRRSEDDMILQVSTGKKYYNYDLDVIEDRVWNGYYSELKQFLKDIEYIYLDSIT
SGDRERRNKASEMFANAQVAIEEMSIDQQFVADCKKMRQREIEAQEKWKIEQERVEAEEA
KATAEQYEAEARLAAEVQEREVDGDDGDPDVNQMQVDGEGMIEEVKDEEMADIDAEDEKV
DNKTEEVEVAEPVVAKPAVVERAVPDPVVTEVTETATIGTEPAINGHANGTVVEEENVEA
EVQVAPPVEASPSPPPTPDPPLIVDTKKAQDVVDFLAGNTGELTIEELEQVYAAIIDIIW
AHRASWDRNVIINAITAQLDEIVNAFHE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG