YALI0F23441g

Overview

Description similar to uniprot|Q03557 Saccharomyces cerevisiae YMR293c HER2 Mitochondrial protein required for proliferation or remodeling of the ER that is caused by overexpression of Hmg2p
Locus type CDS
Locus tag YALI0F23441g

Location

Species Yarrowia lipolytica Positions 3069706..3071211
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1506 (nuc.)
Previous locus YALI0F23397g Next locus YALI0F23452g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F23441g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F23441gYALI0F23441g_mRNA-001YALI0F23441g_CDS-001

Nucleotide sequence

 

>YALI0F23441g
ATGGAAAACATCATCAAGAGTAATCCCTACAGCAATGCTCTGATCTCTACCGCCGAGAAC
CCCCAGGTGGCTCAATCGGGAGCCCTGGCAGGAATTGCACTGGCCGTCAAGGACAATATT
TGCACCAACGAAATGCACACCACTTGTGCATCTGGCATTCTGGAAACGTTCACATCCCCC
TTCGATGCCACCGTTGTCGACCTGCTGAAACAAGAGGGCGTTTCCATTGTTGGAAAGGCC
AATCTCGACGAGTTTGGTATGGGCTCAGACAATGCAAACTCATGGTTTGGACCTGTCTTC
AACCCCCTGTACCCCGATGAACCTCACACTCCCGGTGGTTCTTCCGGAGGCTCAGCTGCC
GCTGTGGCTGCAGACATGTGCCATTTTGCTCTTGGAACAGACACCGGAGGAAGCGTGCGA
TACCCGGCCGCTCAGTGCTCCGTCATTGGCCTCAAGCCCTCGTACGGACTTATCTCGCGA
CACGGAGTCATTGCGTATGCCCAGTCTCTCGACACAGTTGGAATTCTCACCAAGGACATC
GATCTGCTCGAAAAGGTGTTCAACATCCTCAACAAGTACGATCCCTTGGACCCCACCAGT
CTCACACCCCATAAGAGAGCCAAGCTCAAGCCTCCCAAGCCCCACAGAAAGCTCACGTTT
GGTCTCGTCAAGGAATACAACATTAAGGGCATCTCCGAGAATGTCAAAATGGCGTGGTCA
CAGATCATGGACGAGCTCATCAAGATGGGCCACGAAGTAGTCACATGTTCGATTCCTGCC
ATCAAAAACGCCCTTCCTGCCTACTACGCTATCGCACCAGCAGAGGCTTCATCGAACTTC
GCACGATTCGACGGTATCAGATATGGATCTCGAGCTCCCGAGGACCGAGGGGAACATGGT
ACCCTGTACGCTCCTACTCGACAGGAGTACTTTGGAAATGAAGTCAAGCGGCGAATGTGG
CTTGGAACATGGAACCTGTCGACAGACGCCTTCAACCACGACTATATTCGGTCGCAAAAG
ATTCGACGAATTCTACAGGAGGATTTCGACGAGGTCTTCAACCGACCCAACGTGCTTTCT
GGTAACGAGGGTCAAAAGGCCAACGATGAGCCCGGTGTGGATTTCATCATTGCTCCCACT
TCTAACTGTGCGCCTTACCCTCTTTCTAAGCTCAACGACTCTGCTCCCGTTGATACCTAC
CTCAACGATGTACTCACCGTCCCTGCTTCCCTGACCGGTATTCCTTCCCTCAACATTCCC
TGGAAGACCAAGCAGGGCAACGTAGGCATGCAGATCATGGGACAGTACGGTGATGATTTG
GGCGTTATGAAGGTCGGTCGACTGCTCCTGGACAAGTGCAAGGAGCTCCACCAGGATTAG
TGGATGTATATATAGATTGACTACATGGTAATAGACTCAGAACTGACAACACGGGTGGTG
GAGGTGCCTCAGTAAAAGCACGCACAGCGGTCATTACGTGATAAGTGAAACAGTCATCGA
TAATTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F23441g_CDS-001

Protein length: 460 aa.
Product: Subunit of the trimeric GatFAB AmidoTransferase(AdT) complex, putative

>YALI0F23441g_CDS-001 MENIIKSNPYSNALISTAENPQVAQSGALAGIALAVKDNICTNEMHTTCASGILETFTSP
FDATVVDLLKQEGVSIVGKANLDEFGMGSDNANSWFGPVFNPLYPDEPHTPGGSSGGSAA
AVAADMCHFALGTDTGGSVRYPAAQCSVIGLKPSYGLISRHGVIAYAQSLDTVGILTKDI
DLLEKVFNILNKYDPLDPTSLTPHKRAKLKPPKPHRKLTFGLVKEYNIKGISENVKMAWS
QIMDELIKMGHEVVTCSIPAIKNALPAYYAIAPAEASSNFARFDGIRYGSRAPEDRGEHG
TLYAPTRQEYFGNEVKRRMWLGTWNLSTDAFNHDYIRSQKIRRILQEDFDEVFNRPNVLS
GNEGQKANDEPGVDFIIAPTSNCAPYPLSKLNDSAPVDTYLNDVLTVPASLTGIPSLNIP
WKTKQGNVGMQIMGQYGDDLGVMKVGRLLLDKCKELHQD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG