YALI0F23375g - SRP101

Overview

Description uniprot|Q9Y7B0 Yarrowia lipolytica YALI0F23375g SRP101 Signal sequence receptor alpha subunit
Locus type CDS
Gene name SRP101
Locus tag YALI0F23375g

Location

Species Yarrowia lipolytica Positions 3063266..3065007
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1742 (nuc.)
Previous locus YALI0F23353g Next locus YALI0F23397g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F23375g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F23375gYALI0F23375g_mRNA-001YALI0F23375g_CDS-001

Nucleotide sequence

 

>YALI0F23375g
ATGATTGACCACTTTGTCGCGTTTACAAAGGGAGGAATTGTCAAGTGGCAGTACTCCCCT
CCCTCAGCATCCAACGTCACACATATTGTCAATGATCTGATATCCGACGTGTTCATCGAA
GAGTCCTATCCCGTCCAGGACTCCACCTACACCAAGGACATTTACACGGCCCGATGGGCA
GTCGCCAACGAGCAGGGGCTCGTATTTGTGTGCATTTACAAGACTCTTCTTCATCTGCCT
TGGGTGGGTCAGCTGGTTACCCAAGCCCGACAACTGTTCCCCCAGTTGGACGATAACGAG
TACGAAGCATGGTTCGCTACAAAACTGGCTTCCCTGGAGGCAGAGACGGTCAAGCCGGAG
CCCGTGGCAAAGGCAAAGGTCCCTGTGATCGAGAAGATTGAGTCGTCTGTTACTGTTGTC
GATACAGACTCTGCAGCCAGCGGAGCATCTACACCTATTGGAGGAGGAAAGACCCGTCGG
CGAGGAAAGAAGGGCAAGAAGGACGACTCTACAGCGGAAAAGAAAAAGAAGGGTGTCATG
CGAAAATGGGGAGAGGATGGCCAAGCCCTGGATGTCGGTTCTGACGACGACGCGGATCTT
GACTTCTCCTCTGGACCCTCAGGAGCTACGGCTGTTGTGGAAGATGTGGATATGACCAAC
TATGGAGGAGCCAACAAGCAGGGCGATTTTGTGCTCAAACAACTGGGTGACGACGAGCCT
CCGATCCCCTCCAAGTCGAGATTCGGTTTCCTGAAGAACATCATGGGCGGTAAGACTATC
ACACAGGAAGATATGGACAAGGTGACTGCCAAGGTCGAGGAGCAGCTCATGAAGAAGAAC
GTGGCCAAGGAGGTTGCAGTCCACCTATGTGACCAGGTGTCACGGTCACTAGTCGGCTGC
ACTACCAATTCGTGGACCACCGTCGAGCAGACCGTGCAGCAGGCCATGGCGGACGCTCTT
CGAAAGATTCTGACCCCTTCGGCCTCTCTAGACCTGCTCCACGAGGTCCAGCGGCACAAA
AAGCTCGGTGGAGGACGTCCCTATGTTATTTCTGTGGTTGGAGTTAACGGTGTGGGCAAG
TCCACCAACCTGTCCAAGATTGGCTTCTGGCTCCTGCAAAACAAGATGCGACTTCTGGTG
GCTGCATGTGACACGTTCCGATCCGGAGCTGTCGAGCAGCTGGGTGTCCATGTCAACCGA
CTCAGTGAGCTTGCTGGGCGTCAGGGAACTGGAGAGGTTGAGCTCTTCGCCCAGGGATAC
GGTAAAGACCCTGCTCACACTGCTGAGAAGGCCGTTGAGTACGGCGAGAAGCATGGCTTC
GACGTGGTTCTCATCGATACCGCCGGTCGACGTCATAGTGATAAGCGTCTGATGGGAGAT
CTGGAGAAGTTTGCTAAGCGAGCTCGACCCAACAAAATCATCATGGTGGGAGAGGCTCTG
GTTGGAACTGACTCTGTGCAGCAGGCTCGAAACTTCAACGACGCCTTTGGCAAGGATCGA
AACTTGGACTTCTTCCTCATTTCAAAATGTGACACTGTGGGAGACATGATCGGTTCGATT
GTCAACATGACCTACGCGACCAACATTCCCGTGCTGTTTGTGGGTACTGGTCAGCATTAT
ACTGATCTACGAACCCTGTCAGTTGACTGGGCCGTGAGACTATTGACTCAGTAAAAAATC
GAGGGGGTATAGTATATATAAAGCATTACAGCACGAGTAGTAATGTCACTGATGAGTTTT
CC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F23375g_CDS-001

Protein length: 558 aa.
Product: Signal sequence receptor alpha subunit
Gene: SRP101

>YALI0F23375g_CDS-001 MIDHFVAFTKGGIVKWQYSPPSASNVTHIVNDLISDVFIEESYPVQDSTYTKDIYTARWA
VANEQGLVFVCIYKTLLHLPWVGQLVTQARQLFPQLDDNEYEAWFATKLASLEAETVKPE
PVAKAKVPVIEKIESSVTVVDTDSAASGASTPIGGGKTRRRGKKGKKDDSTAEKKKKGVM
RKWGEDGQALDVGSDDDADLDFSSGPSGATAVVEDVDMTNYGGANKQGDFVLKQLGDDEP
PIPSKSRFGFLKNIMGGKTITQEDMDKVTAKVEEQLMKKNVAKEVAVHLCDQVSRSLVGC
TTNSWTTVEQTVQQAMADALRKILTPSASLDLLHEVQRHKKLGGGRPYVISVVGVNGVGK
STNLSKIGFWLLQNKMRLLVAACDTFRSGAVEQLGVHVNRLSELAGRQGTGEVELFAQGY
GKDPAHTAEKAVEYGEKHGFDVVLIDTAGRRHSDKRLMGDLEKFAKRARPNKIIMVGEAL
VGTDSVQQARNFNDAFGKDRNLDFFLISKCDTVGDMIGSIVNMTYATNIPVLFVGTGQHY
TDLRTLSVDWAVRLLTQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG