YALI0F20790g

Overview

Description similar to uniprot|P05373 Saccharomyces cerevisiae YGL040C HEM2 Delta-aminolevulinic acid dehydratase, catalyzes the conversion of 5-aminolevulinate to porphobilinogen, the second step in heme biosynthesis
Locus type CDS
Locus tag YALI0F20790g

Location

Species Yarrowia lipolytica Positions 2773413..2774581
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1169 (nuc.)
Previous locus YALI0F20768g Next locus YALI0F20812g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20790g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20790gYALI0F20790g_mRNA-001YALI0F20790g_CDS-001

Nucleotide sequence

 

>YALI0F20790g
ATGGTCCACAAAGCCGAGTACCTTGAAGAACACGAGACCCAGATCTCCTCCATTCTGAGC
GGCGGTTACGCCCACCCTCTGTCTCGACAGTGGCAGCAGAAGAACCGCCTCACCAAGGAT
ATGTTCATCTATCCTCTTTTCGTCACTGATGATCCCGAGGAGGAGACTCCTATCAGCTCT
CTTCCCGGCCAGAAGCGATGGGGCGTCAACAAGCTGGTGCCCTACGTCGACTCTCTGGTC
AAGAAGGGCCTCCGATCTGTCATTCTTTTCGGTGTTCCTATGAAGGAGGGTGTTAAGGAT
CTTGAGGGAACTGCTGCGGATGATCCCGAGGGACCCGTTATTCAGGCCACCAAGGCTCTC
AAGAAGGCCTTCCCTGACCTGTTTGTCATGTGTGACGTTTGCCTGTGCGAGTACACCTCG
CACGGTCACTGCGGCGTTCTTCGAGAGGACGGAACTGTTATCCGAGACACAACTGTGCGA
CGTTTGGCTGCCGTGGCTGTCAATTACGCCAAGGCAGGAGCTGACTGTGTGGCACCCTCG
GACATGATTGACGGTCGAATCCACGACATCAAAAAGGGCTTGCTCAAGGCCGGTCTTGCC
CACAACGTCATGGTTATGAGCTACACTAAGTTCTCCGGAAACCTGTACGGACCTTTCCGA
GAGGCTGCCTGCTCTGCTCCCAGCCACGGAGACCGAAAGCGATACCAGCTCCCCGCTGGC
GGTCGAGGTCTCGCTCGACGAGCTCTTGCTCGAGACCTGGCCGAAGGTGCCGATGCCGTC
ATTGTCAAGCCTTCCACCTTTTACCTGGATATCGTGGTGGACGCTGCTGAGATCTGCAAG
GACGTGCCTATTGCTACCTACCAGGTTTCCGGAGAGTACGCCATGATCCACGCAGCTGCC
GAGAAGGGCGTTGTTGATCTGGAGGTGATGGCCTTCGAGGCGGCCTACGGTAACCTGCGA
GCCGGAGCCAACCTCCTTATCTCTTACTTTACCCCCGACTTTCTCGAGTGGTTGGACCAC
CACCACTAAGGTGACACTACTAAGACGACAAGGCCCGATGACGAAGTAATGAGACCATGC
CCCTAGAGTATCTAGATAATTATTGATGAAGAAACGAGAAGATATATTACAGCAGCAACG
CCCTCCACTCGTGGATCCAACTACAATAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20790g_CDS-001

Protein length: 343 aa.
Product: Aminolevulinate dehydratase, putative

>YALI0F20790g_CDS-001 MVHKAEYLEEHETQISSILSGGYAHPLSRQWQQKNRLTKDMFIYPLFVTDDPEEETPISS
LPGQKRWGVNKLVPYVDSLVKKGLRSVILFGVPMKEGVKDLEGTAADDPEGPVIQATKAL
KKAFPDLFVMCDVCLCEYTSHGHCGVLREDGTVIRDTTVRRLAAVAVNYAKAGADCVAPS
DMIDGRIHDIKKGLLKAGLAHNVMVMSYTKFSGNLYGPFREAACSAPSHGDRKRYQLPAG
GRGLARRALARDLAEGADAVIVKPSTFYLDIVVDAAEICKDVPIATYQVSGEYAMIHAAA
EKGVVDLEVMAFEAAYGNLRAGANLLISYFTPDFLEWLDHHH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG