YALI0F20812g

Overview

Description similar to uniprot|A1CQI6 Aspergillus clavatus DUF1000 domain protein
Locus type CDS
Locus tag YALI0F20812g

Location

Species Yarrowia lipolytica Positions 2775213..2776026
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 814 (nuc.)
Previous locus YALI0F20790g Next locus YALI0F20834g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20812g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20812gYALI0F20812g_mRNA-001YALI0F20812g_CDS-001

Nucleotide sequence

 

>YALI0F20812g
ATGGACTGCCATTCTGAACACGTTGAACACGATCACGGTGACCACGGCCACGACCATGGA
CACGACCACAGTCACGTTCCCCAGCCCCATACCTCTTCGGCTCAGACTCTGTATAATCGG
ATTTCGCACGCTGGCATCCGAACCCTGAACGAGTCTGAAGAGGGAGCCGGAGCCTCTGTC
TTCAAGGACTGGGAGTCCCGTCTGGACACCTCCAAGTACCTGGAGAGTGACGTGGACGAG
CAGCTTCTTATCCACGTGCCATTCACGGGTCTGTGCAAGATCCACTCGCTGCTCATTCGA
ACCACCAACGACGACTCTGCCCCTCGACACATGAAGCTATTCAAGAACAGAGATGACCTC
GACTTTTCCACCGCCTCCGATCTCACTGCCAACCATGTGATCGAGCATCCCGAGGGGGTC
GGAGGCACTCTGGATCACTCCATTGAGGTCGCCCCTACGTCGTCGTCTCTGGATGAAGAG
GGTATTGCTGAATATGCACTTTCGCGGGCCCAGTGGTCCAACATCACGAGTCTGACGCTG
TTTGTGGAGGACAACTACGGCGAGGACGTGACCCGAATTCTTTACATTGGTCTACGTGGC
GAATTCAAGGAACTTAACCGAGCCCCCGTCGTGACGCTGTACGAGTCAGCCGCCAACCCC
GCGGATCACAAGAAGATTGTGCCTGGCGAGGAGTATGTTGGAGACACGCTTTAATCAGCC
AATTCCAAGAACCTTTAGTACGTATCACCTGTATTTATTTAAACCAAAGTGTTGTATATA
TGAAGCCAATAAATATTGATGTTTTTTTATGTTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20812g_CDS-001

Protein length: 238 aa.
Product: DUF1000 domain protein, putative

>YALI0F20812g_CDS-001 MDCHSEHVEHDHGDHGHDHGHDHSHVPQPHTSSAQTLYNRISHAGIRTLNESEEGAGASV
FKDWESRLDTSKYLESDVDEQLLIHVPFTGLCKIHSLLIRTTNDDSAPRHMKLFKNRDDL
DFSTASDLTANHVIEHPEGVGGTLDHSIEVAPTSSSLDEEGIAEYALSRAQWSNITSLTL
FVEDNYGEDVTRILYIGLRGEFKELNRAPVVTLYESAANPADHKKIVPGEEYVGDTL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG