YALI0F20768g

Overview

Description highly similar to uniprot|P32495 Saccharomyces cerevisiae YDL208w NHP2 nucleolar rRNA processing protein
Locus type CDS
Locus tag YALI0F20768g

Location

Species Yarrowia lipolytica Positions 2772697..2773327
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 631 (nuc.)
Previous locus YALI0F20746g Next locus YALI0F20790g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20768g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20768gYALI0F20768g_mRNA-001YALI0F20768g_CDS-001

Nucleotide sequence

 

>YALI0F20768g
ATGGGCAAAGACAAGGGAGATATCACCGTTGAGATTGACGAGGTCGACAACTACGACGCT
CGAATGGAGGCTCTGCTGCCCTTCGCCAAGCCTCTTGCCCCCAAGAAGCTCAACAAGAAG
GTGCTCAAGACCGTGAAGAAGGCTTCCAAGGCCAAGCACGTTAAGCGAGGTGTCAAGGAG
GTTGTCAAGGCTCTCCGAAAGGGCGAGAAGGGTCTTGTCATCATCGCTGGAGACATTTCT
CCCATGGATGTCGTCTCTCACATTCCCGTTCTCTGTGAGGACAACGGTGTTCCTTACCTC
TTCATCCCCTCCAAGGAGGATCTCGGAGCTGCCGGTGCTACTAAGCGACCCACTTCCACC
GTCATGATTGTTCCCGGCGGAGGCAAGAGTAAAAAGGCCGACACCAAGGTCGAGTACAAG
GAGAACTTTGACGAGATTGTCAAGGACGTCAAGAAGCTCGAGGATTAGTTATTTATAATG
TACACTAGCATGAGAAAGGAAGGAAGAGGGTGTCAACTAATCTTGACAGTAGGGTCCGAT
GGTTAGGATAGTCGGACTAAATTATGTATAGAATGTTACCTATTCGATTTGTTGCTCGTA
GTGGGATTGTCCGAGTGCAGCAATACCTCCT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20768g_CDS-001

Protein length: 156 aa.
Product: Protein related to mammalian high mobility group (HMG) proteins, putative

>YALI0F20768g_CDS-001 MGKDKGDITVEIDEVDNYDARMEALLPFAKPLAPKKLNKKVLKTVKKASKAKHVKRGVKE
VVKALRKGEKGLVIIAGDISPMDVVSHIPVLCEDNGVPYLFIPSKEDLGAAGATKRPTST
VMIVPGGGKSKKADTKVEYKENFDEIVKDVKKLED*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG