YALI0F20438g

Overview

Description weakly similar to uniprot|P36144 Saccharomyces cerevisiae YKR060w
Locus type CDS
Locus tag YALI0F20438g

Location

Species Yarrowia lipolytica Positions 2718351..2719310
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 960 (nuc.)
Previous locus YALI0F20416g Next locus YALI0F20460g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20438g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20438gYALI0F20438g_mRNA-001YALI0F20438g_CDS-001

Nucleotide sequence

 

>YALI0F20438g
ATGAAACTCACGCAAAAGCCAGCCATTAAGGCACTGTTCAAGTCCGCCAAACAGGAGCTA
ACCGAGGACCCCAACCAGCGAATTCCCGTCCACCTCACCGTCACCACAACATCCAAAACC
AATGTCAGAGTTCCCGGGCAGCGAGGTATGAACAACATTTCAGTCCCCTATGTCATTCCT
CTGCACCACAAGATCCACAAGTCGATATCCCAGGCGAAAATACTGCTCATAGTGCCACAC
CCTACCGCCAAATATGCAGAGATCTTCCAGGCTGACGAAGCTAGCACCAAAGACACATTT
GCTGATATCATTTCGGTCAAGAAGTTTCGACCTAAATTGCGAAAGGACCCCTTGTCTGTC
GGAAAGGACTTCGATCTGATTGTCGCCGACTCCCGAATCCACGAGGAGGTCGTGGAGTGT
TATGATAGACTGTCCAAGAAGATTTCTCTGAGACATCTGACTAAGCCGTTCCCCATCAGA
TTCATCCAACCTGGAAAAGAAGACGATGCAAGAGACGCAAACATGTTTGCCGATCCGGAC
TACGTCAAGGCACAGGTGCGAGGTTTGCTTCGATCCACGTCGGTGACGCTCCCCAGATCA
ATGGCATGCGAGCAGGGCGCTGTTAATCTGACTGCCCTCGTCGGATACCTGCCAGACAAT
ACCGCCAAGGAGATCGAGGAGAACTCGCATCGAGTGGCAAACAACATCGTCGACAACCTC
GTGGACGGGGGAGCTCGATCAACCAAAACTATTTACATCAAGAGCCCTAAGACAGTTGGT
CTACCAATCTGGAGACTGGAAAAGGAGGGCCAGACACTGGAGGAGGAGGAATAAACAGCA
TATATCCAATAGCATTATATAATAAGAACACACCACTACAGTACAAACTGTACTTGCACC
GTTAGTGGCTGTACCAATACACACTAAATACGATACTACTTGTCTCTACGGACTACAAGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20438g_CDS-001

Protein length: 278 aa.
Product: Conserved hypothetical protein

>YALI0F20438g_CDS-001 MKLTQKPAIKALFKSAKQELTEDPNQRIPVHLTVTTTSKTNVRVPGQRGMNNISVPYVIP
LHHKIHKSISQAKILLIVPHPTAKYAEIFQADEASTKDTFADIISVKKFRPKLRKDPLSV
GKDFDLIVADSRIHEEVVECYDRLSKKISLRHLTKPFPIRFIQPGKEDDARDANMFADPD
YVKAQVRGLLRSTSVTLPRSMACEQGAVNLTALVGYLPDNTAKEIEENSHRVANNIVDNL
VDGGARSTKTIYIKSPKTVGLPIWRLEKEGQTLEEEE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG