YALI0F20416g

Overview

Description highly similar to uniprot|P39078 Saccharomyces cerevisiae YDL143w CCT4 component of chaperonin-containing T-complex
Locus type CDS
Locus tag YALI0F20416g

Location

Species Yarrowia lipolytica Positions 2716211..2718291
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2081 (nuc.)
Previous locus YALI0F20394g Next locus YALI0F20438g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F20416g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F20416gYALI0F20416g_mRNA-001YALI0F20416g_CDS-001

Nucleotide sequence

 

>YALI0F20416g
ATGAGCGTTCCTACAGGCACAAAGTCCGGATTTAAGAACAAGGAAAAGCCCCTTGAGGTT
CGAAAGAGCAACATTCTTGCTGCTCGAGGTGAGTATCTTTGGATTGGATGATTTTGGAGG
CGGTTTGACCGTGCAAACCCGAATTTTTGTCGTCATACTAACACATAGCCGTGGCTGATG
CTATCAGAACTTCCCTTGGTCCCAAGGGTATGGATAAGATGGTGAGTACTTGGAGGAGTG
GAGCTATTGAAGTTTTGGTTCGATTGTGGCGATTCTGTGCGACCTAAGGGTCCGATATGG
CATGTGGAATCAGGTGGAAGGAGTGGCTTTATGCAGGCATATTATGATGATAGGGGTTTG
TGGGGGGGGTCGTTGATTTTGGCGTCCAATGATGACACGTTTGTCGTTGTCATACAATTG
TTGAATTGCCCCTGCTACGTGTGTCTTCACGCGTTCCAATATGTCCGCCTGAGACCACGT
TCCATGGCTAAGTGAATGTCTCGTACGCCTCGATATTGATACAATCGCAATAGCTAAAAA
GTGATGAGAATATCGTTCGGATAGCACACGACCTATTCAGCCGACTAACACAGATCCAAA
CTGCACGAGGACAGGTGATCATCTCCAACGATGGTAACACAATTCTCCAGCACATGGCCG
TCATGCATCCCGCAGCCAAGATGCTGGTCGATCTCTCTGCCTCCCAGGACTCTGTCGCTG
GTGATGGTACCACATCGGTTGTTATTCTGGCCGGATCTCTTCTCGGTGCTGCCGACAAGC
TGCTCAAGAAGGGCATCCATCCCTCTATCATCGCTGAGAACTTCCAGAAGGCAGCCCAGC
GAGCTGCCGAGGTGGTCATGGACATGTCCAAGCCCATCGATCTGAGTGACCGAGAGACTC
TGATTCGAGCCGCCTCCACCTCGCTCAACTCTAAGATTGTCTCTCAGTTTTCGTCCACCC
TGGCCCCCATGCTGGTGGACGCTGCTCTTCAGGCTGCTAAGAAGACCCCCGAGGGTGGCC
TGACTCTGGATCTCAACGACATTCGAATCATCAAGTCTCTCGGTGGCACCATTGAGGACA
CCACTCTGGCCAACGGCCTGGTGCTCAACAACTACGCAGTCAAGAACGCTGGAGGCCCCT
CGCGCATGGAGAAGGCCAAGATTGGACTCATCCAGTTTCAGCTCTCGGCCCCCAAGCCCG
ACATGGAGAACCACATTGTCGTCAACGACTACCGACAGATGGACAAGATTCTCAAAGAGG
AGCGACAGTACATTCTTGGCCTGGCCAAGGCCATCAAGAAGTCCAAGTGCAACGTGCTGC
TCATTCAGAAGTCTATCCTTCGAGACGCTGTTTCCGAGCTTGCTCTGCACTTTTTGGCAA
AGCTCAACATCATGGTGATCAAGGACATTGAGCGAGACGACATTGAGTTCATCTCCCGAT
CTACTGGTGCCAAACCCGTGGCCGACATTGAGGCCTTCACTGAGGACAAGCTTGGCTCTT
GTGATCTGGTCGAGGAGGTTGAGTCTTCCGGCTCCAAGACCGTCCGATTCTCCTCTCGAG
AGGGATCGAACACCGTCTCCATTCTCGTTCGAGGAGCAAATGACCTGGTCATTGACGAGA
CTGAGCGATCTCTGCACGATGCTCTGTGTGTCCTTAGATCGCTGTTCCGAGTCCCTGCCC
TTGTTCCTGGTGGAGGAGCCTGTGAGGTCCAGGTTGCACAGGTTATTGGCAAGGAGTCTC
GAGCCATGGACGGTGCTTCTGCCATTTGCTACGAAGAGTTTTCTAACGCCATGCTGGTGA
TCCCCACCACCCTGGCCGAGAATGCCGGTCTCAACCCGGTCAACGTTGTGACCGAGCTGC
GAGTTCGACACGAAAAGGGCGAGGTCAACGCCGGCATTTCGGTGAGACGAGGAACGTCCA
TTATGGTGGAGGAGCATGTCATTCAGCCCGCATTGGTTACCACCTCGGCCATCACTCTGG
CTGCCGAGTGTGCCAAGGGTCTGCTCAGAATTGACGATATCGCCTTTTCCAGATAAATAT
AGAGGGTATTTAGAGTATGGTATGATTGTTATGAGAGAGGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F20416g_CDS-001

Protein length: 528 aa.
Product: Component of chaperonin-containing T-complex, putative

>YALI0F20416g_CDS-001 MSVPTGTKSGFKNKEKPLEVRKSNILAARAVADAIRTSLGPKGMDKMIQTARGQVIISND
GNTILQHMAVMHPAAKMLVDLSASQDSVAGDGTTSVVILAGSLLGAADKLLKKGIHPSII
AENFQKAAQRAAEVVMDMSKPIDLSDRETLIRAASTSLNSKIVSQFSSTLAPMLVDAALQ
AAKKTPEGGLTLDLNDIRIIKSLGGTIEDTTLANGLVLNNYAVKNAGGPSRMEKAKIGLI
QFQLSAPKPDMENHIVVNDYRQMDKILKEERQYILGLAKAIKKSKCNVLLIQKSILRDAV
SELALHFLAKLNIMVIKDIERDDIEFISRSTGAKPVADIEAFTEDKLGSCDLVEEVESSG
SKTVRFSSREGSNTVSILVRGANDLVIDETERSLHDALCVLRSLFRVPALVPGGGACEVQ
VAQVIGKESRAMDGASAICYEEFSNAMLVIPTTLAENAGLNPVNVVTELRVRHEKGEVNA
GISVRRGTSIMVEEHVIQPALVTTSAITLAAECAKGLLRIDDIAFSR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG