YALI0F19580g

Overview

Description some similarities with uniprot|Q03370 Saccharomyces cerevisiae YDR479c pex19
Locus type CDS
Locus tag YALI0F19580g

Location

Species Yarrowia lipolytica Positions 2606986..2608842
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1857 (nuc.)
Previous locus YALI0F19558g Next locus YALI0F19602g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F19580g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F19580gYALI0F19580g_mRNA-001YALI0F19580g_CDS-001

Nucleotide sequence

 

>YALI0F19580g
ATGACCTCGACAGTGGAATTGGCCGAGCCATTATCGTCACAGCGCAATCTCAAAGCCATC
AGCCTGGCGTTCCACAACCAAAACGATGATCAAAATCTGTCATTACAACCCGTCCACTCG
CACGACAGCGATATCGCCAATGGGAGCTCGACCAAAAGCGATATCTCGAGTTTGGACAGC
TCGCCCAAGAACCACTCAGACAGCCACCATAAGGGTCTTACAGATGATGTGTCCGCTGAG
AAACTAAGAGGAGGAAAAATTGCAGACTCGGACGGCAACGTGATGAGCGACGCCTCCGAT
TCGGAGCTGGACACGGACGGCCCCGAACCCATCAACCCCCATGCTAAATTGTCGGTCAAA
CTCATGGACAAGATGCTGGCCCTAGCTCTGCCTCCTAAATCAGCTGCAGTGGCCAAGAGA
GTCAGAATCCAGCAGGGCCAGGACCCCTTTAGTATGAATCTAATGGGAAAGAACTTCAGG
GGCGTCACGTCGCGGTTCACCATCATCTACGAAACCTACTATACCGTGCTGGAGATTCTA
ATGTGGAAGAGACCGTCTTTTACGCTAGGAGTTATGGCCATCTACTCTTTCATCTGTTTG
CATCCCCGACTGCTGTTCATCACCCCATTGGCATACATCATGTTCTGTGTCATGGTTCCC
GCGTACGCCTCCAGACACTACGACGTCCAGGAGAATTATTTGACCACCCAATGGCCTACC
ATTGAACCCAAGATTCCTGCTCCTGCTCCCGAGTTTTCCAGAGACTTTTACATCAACATG
GTGGACACACAAAATGCGATGACCGACTTCATTCGCACTTATGATATCGTTGCTGGCATT
CTGGCACACTTGATCTACTTTGCTGGAGATGAATCACTCAGTGCTGCCATCTACTTTGTT
GGAATGCTTGGGGTAGCTATCTTTTATGTATACGGAGATACCATTCTCCGTATCATGCCA
TGGCGCTTCTTCTTCTTTGTCTTTGGATGGGCTGTCATTCTACTGCTTAACCCGATGCTG
CATAGAATCGTCCTGAGAGAGTACAAGAAGCTCCCTCACGAGACCCGGGAGAAGTTCACA
CCTGAGGCTGTAAAGGAGGTGATTGATGAACTAGCAAGAGACGAGTTCCTGTACCATACC
GCCGATGATGTGAGAGTGATAGAGGTATTTGAGCTGCAAGAACTGGATGTTCACACGAGA
CAATGGAAGACGGCTACTTATGTTGCCCATCCTCACATTCCGTCCATGCTTCATGAGCCC
AATTACTATGCTGATCCTGACGACTTGGGTTTGAGCCCTACCGCTTCAGCTGGATCTGTT
GACTCTGAATCTCGAATCCTACCTCAGTTCCGTCACACAAATGGTATTCCAGACAGGACC
TTTTCGCCCCCGCCAACGACCATGGGCGAGGCCATCAGAAACATTGAAGAGGAGGTGTCT
ATGGCAACCTACGGGGTTAGTTCTCTTCATCAGATCCCTGCGCCCCCAGGAGTTTATTCG
TTAGAGGAAGTTCTACCTCCTACAGGATGGACCTTCCTGGAGGTCCCTGAGAGAGATATG
CTATCTTCTCTACCGCGGTCGTCCGATTGGGAAATGGACTACATGCCTGAACAGTGGGTA
GCTTGGTGGGGTGCCTGGCGCAAGTACCTCGAGATTGACCAGGACGAAAAGTGGGTCTAT
GACATTCTTCCCGACGGATTCAGGGGTACTTGGAGAAGAAGACGGTGGACCAGTCTGTGC
AAGCGAAAGTCGTATCTGAAGTCCAATGTTGTTGGTCGTGTCGGAGAACGGCGTGAGCAC
GATTGAGCCGCAAAACAATAAGATCATATAAGTTATTGCATTATTTATTATTCAGCC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F19580g_CDS-001

Protein length: 602 aa.
Product: Conserved hypothetical protein

>YALI0F19580g_CDS-001 MTSTVELAEPLSSQRNLKAISLAFHNQNDDQNLSLQPVHSHDSDIANGSSTKSDISSLDS
SPKNHSDSHHKGLTDDVSAEKLRGGKIADSDGNVMSDASDSELDTDGPEPINPHAKLSVK
LMDKMLALALPPKSAAVAKRVRIQQGQDPFSMNLMGKNFRGVTSRFTIIYETYYTVLEIL
MWKRPSFTLGVMAIYSFICLHPRLLFITPLAYIMFCVMVPAYASRHYDVQENYLTTQWPT
IEPKIPAPAPEFSRDFYINMVDTQNAMTDFIRTYDIVAGILAHLIYFAGDESLSAAIYFV
GMLGVAIFYVYGDTILRIMPWRFFFFVFGWAVILLLNPMLHRIVLREYKKLPHETREKFT
PEAVKEVIDELARDEFLYHTADDVRVIEVFELQELDVHTRQWKTATYVAHPHIPSMLHEP
NYYADPDDLGLSPTASAGSVDSESRILPQFRHTNGIPDRTFSPPPTTMGEAIRNIEEEVS
MATYGVSSLHQIPAPPGVYSLEEVLPPTGWTFLEVPERDMLSSLPRSSDWEMDYMPEQWV
AWWGAWRKYLEIDQDEKWVYDILPDGFRGTWRRRRWTSLCKRKSYLKSNVVGRVGERREH
D*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG