YALI0F19602g

Overview

Description highly similar to uniprot|Q9C2L8 Neurospora crassa Probable GTPase Rab7 protein
Locus type CDS
Locus tag YALI0F19602g

Location

Species Yarrowia lipolytica Positions 2608815..2609879
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1065 (nuc.)
Previous locus YALI0F19580g Next locus YALI0F19624g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F19602g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F19602gYALI0F19602g_mRNA-001YALI0F19602g_CDS-001

Nucleotide sequence

 

>YALI0F19602g
ATGCCGCCCAAAAAGAGAACCATGCTGAAGGTCGTCATCCTCGGCGACTCCGGCGTTGGT
AAGTCGTCGTTGATGTAAGTATACCAACACAAAGCGCAGTCTGCTGGGCCCCCTGGTTGA
TGTGCTACCATGGCAACCTTTCGTCGACTCAAACGGTTGTTGGGCAACAAAATCGTCATT
GGGATTATGCCACAGATGAAGAGAAGACAGAGATGGGGAGCAACGAATGACATCGTTTCC
CACAGCTTGATTCGCTTTCTTCCACCTACTATCAGATACTAACCAAGGCAACAGTACGTC
AACAACAAGTTCAGCACACAATACAAGGCCACGATCGGAGCCGACTTTCTCAACAAAGAG
CTGACTCTCGAGGGCCGAAAAGTCAACATGCAAATCTGGGACACGGCCGGTCAGGAACGG
TTCCAATCCCTCGGTCTGGCTTTCTACCGAGGCGCCGACTGTTGCGTTCTGGTCTACGAT
GTCAACAACTCCAAGAGTTTTGATGCCCTGACTCTGTGGCGAGATGAGTTCCTTCTCCTT
GCCAACCCCCGAGACCCAGAAAACTTTCCTTTTGTGGTGATCGGTAACAAGGTGGATGTG
GAGGAGAGCAAGCGGGCAGTTTCCGCCAAGCGAGCCCAGGCCTTCTGCAAGGCAACCGGC
AACATTCCCTATTTTGAGACCAGTGCCAAGGAGGACACTGGTGTAGACCAGGCTTTCGAG
ACCGTTGCTCGAAACGCCATGGCACAGGTGGACTCAGAGGACTACACGGACGATTTCGCC
GACACCATCAACATCCATCTGGATAATGAGCAGTCCAACTGTGCTTGTTAAGAAGTATTT
ATCGCAGGGGCACGTATGTTAATATATTAGAGGTTAGGATGGGATTTTGTGTACGGTAGC
TAGATGAGCTGTAGACGACGTTCATGGCTCCTTCGGTTTAACCACTGTACACTGTGCAAC
GGACAAGGTGGTTACAAGAGCCTACCCTACTCGTACCATACTTGTTCAGGAAGAACTTGT
CACTTCCAATTACATATGGCTGAATAATAAATAATGCAATAACTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F19602g_CDS-001

Protein length: 206 aa.
Product: GTPase, putative

>YALI0F19602g_CDS-001 MPPKKRTMLKVVILGDSGVGKSSLMQQYVNNKFSTQYKATIGADFLNKELTLEGRKVNMQ
IWDTAGQERFQSLGLAFYRGADCCVLVYDVNNSKSFDALTLWRDEFLLLANPRDPENFPF
VVIGNKVDVEESKRAVSAKRAQAFCKATGNIPYFETSAKEDTGVDQAFETVARNAMAQVD
SEDYTDDFADTINIHLDNEQSNCAC*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG