YALI0F16489g

Overview

Description similar to uniprot|P27614 Saccharomyces cerevisiae YJL172w CPS1 Gly-X carboxypeptidase YSCS precursor
Locus type CDS
Locus tag YALI0F16489g

Location

Species Yarrowia lipolytica Positions 2204481..2206467
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1987 (nuc.)
Previous locus YALI0F16467g Next locus YALI0F16511g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F16489g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F16489gYALI0F16489g_mRNA-001YALI0F16489g_CDS-001

Nucleotide sequence

 

>YALI0F16489g
ATGGAAAAACAACAATTGAACGAGATTGATTTTGTTGCGGACCAGCAGCAACAGTACGTT
GCTCCCGCAACCCGATCGTGGAAGAAAATCGGCTTCTTGGTCGTTTCTGCCCTCACGGTG
GGCACTCTGGTTTGCAAGTCTGGAGTCTCGACCAAGTGTATGAACCACATGTATGGCAGT
GCGCATTCTGCGACTGGCGATTCTCTTTGTCCCTCGCAGGCCAAGCTTGTTCCCGAGGGA
TTCACCAACCTGGATTTCATTCTCAAGGATGAGAAGTACCACGACAAGGCTCTGAAAACC
TTCCAGGGTGCCATTCAGATCCCTACCGAAAGCTACGACGACATGGGACCTGTGGGCGAG
GAGCCCCGGTTCGACATTTTCAAGAACTTTTCTTCCTACCTGGAAAAATCCTTCCCCAAG
GTGCACTCTGAGCTCGAGGTTGAGCATGTCAACACCTATGGCCTCGTCTACACTTGGAAG
GGATCTAACAAGGATCTCAAGCCTCAATTGCTCATGGCTCATCAGGATGTTGTTCCTGTG
AACAGCGACACTGAGGAGAAATGGACTCATCCCCCATTTTCTGGCTACTTTGATGGCAAG
TACATCTGGGGACGAGGCACTGTTGACACCAAGAACACTGTTGTTGGCTCTCTGGCTGCA
GTTGAGCTGCTGCTGAAGGAGGGTTACACTCCCGAGCGAACTCACATTCTTGGCTTTGGC
TTTGACGAGGAGATATCGGGTCCCCAGGGCGCCAAGTTCATCTCTGAGCATCTCTACAAC
AAGTACGGTGAGAAATCTCTGTTTGCCATCCTTGATGAGGGTTCTGGAATTCTAGAGACC
GAGAATTTCGCCATGATTGTTGCTGCTACCGGCGAGAAGGGCTATCTGGACGTTTCCATC
TCTGTTAACGTAGCCGGTGGACACTCTTCTATGCCCCCCAAGCATACTGGTATTGGACTT
GCTGCTCTGATCGTGGCGGAGATTGAGAAGACCCCTTATAAGCCTCTGTTGACCCAGCAG
AACCCCTTCTTCTACACTCTTCAGTGTGTTGCTGACCATGATCCCAGTCTCAGTGACGCC
CTCAAGACTCTTATTCGAAAGTCTGGCAACGACCTTATTGCCAACAAGAAGCTCGTGAGC
ATTCTCAGCGGCAATCCCAAGTACAGAGATCTCATTCGAACCACCCAGGCGGTAGATATC
ATCAACGGAGGAGTCAAGAGCAATGCTCTGCCCGAGACCACCACTTTTGTTGTCAACCAG
CGAATCGAGATTGAGTCTGACGTGTCTACTGCCCAGGACAAGATTGTCCAGAACGTGCTA
ACCATTGCCAAGGAGCACGATCTGTCTGTTTCTGCCTTTGGTGACTTCATCATTGAGGGC
AAGTCCGGAGAAGTTGTTGTTGAGCTCTTTGGCTTGCCTCTCGAAGTCGCCCCTCAGGCC
CCCGTCTCTGGACCCACTTGGGATCTCATTGTTGGAACTGCCCTGCACGTTTTCAAGGAC
ACTGTTTACCCCGAAGACTTTAACCTCTTTGCTGCTCCCGGAATCATGACCGGAAACACC
GACACTCGACATTACTGGGCTCTGACCGACGCCATTTACCGGTTCAACCCCGTCCGAGAG
TCTGCCGCTTTCGGCATCCACACTGTGAACGAGCACCTCGAGTTCCAGAGCCACCTGGAG
ACCATTGCCTACTACTACGAGTTTGTCAAGAACGGCGAGCACTTCAGCAAGAAGCAGGAG
TAATGCAGTGATAGGGAACCTGCTTGAATACCCTACACCATGTGGCGTATCTGCACTCCA
CTCGTACCTATATGTAAATGAATGATGTTTAAATGAAGCGAGAATCGGTGCAGCACCAGA
TAAGTTATCGTCATCAGGAGAGAAAAAAGACTGGTGACTATCCTCGCGGTTATCTACCCC
ACCGTTTGTTTGTTGTCTATCTAGTTGATGTGATAAGGTGAAGATAAGAGATGATAAGAG
ATAGGGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F16489g_CDS-001

Protein length: 581 aa.
Product: Vacuolar carboxypeptidase S, putative

>YALI0F16489g_CDS-001 MEKQQLNEIDFVADQQQQYVAPATRSWKKIGFLVVSALTVGTLVCKSGVSTKCMNHMYGS
AHSATGDSLCPSQAKLVPEGFTNLDFILKDEKYHDKALKTFQGAIQIPTESYDDMGPVGE
EPRFDIFKNFSSYLEKSFPKVHSELEVEHVNTYGLVYTWKGSNKDLKPQLLMAHQDVVPV
NSDTEEKWTHPPFSGYFDGKYIWGRGTVDTKNTVVGSLAAVELLLKEGYTPERTHILGFG
FDEEISGPQGAKFISEHLYNKYGEKSLFAILDEGSGILETENFAMIVAATGEKGYLDVSI
SVNVAGGHSSMPPKHTGIGLAALIVAEIEKTPYKPLLTQQNPFFYTLQCVADHDPSLSDA
LKTLIRKSGNDLIANKKLVSILSGNPKYRDLIRTTQAVDIINGGVKSNALPETTTFVVNQ
RIEIESDVSTAQDKIVQNVLTIAKEHDLSVSAFGDFIIEGKSGEVVVELFGLPLEVAPQA
PVSGPTWDLIVGTALHVFKDTVYPEDFNLFAAPGIMTGNTDTRHYWALTDAIYRFNPVRE
SAAFGIHTVNEHLEFQSHLETIAYYYEFVKNGEHFSKKQE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG