YALI0F16467g

Overview

Description weakly similar to uniprot|P53959 Saccharomyces cerevisiae YNL041c COG6, component of the conserved oligomeric Golgi complex; interacts with Cog2p and Sec35
Locus type CDS
Locus tag YALI0F16467g

Location

Species Yarrowia lipolytica Positions 2201051..2202906
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1856 (nuc.)
Previous locus YALI0F16461r Next locus YALI0F16489g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F16467g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F16467gYALI0F16467g_mRNA-001YALI0F16467g_CDS-001

Nucleotide sequence

 

>YALI0F16467g
ATGGAAACGACGGTGCTTCAAAATAAAATCAGTCGGCTGTTGTCGACAAGTTACACGGAT
GGCGGAACACGTGACGCGCTGGTTGCTCTCGACGACCGTATTACCGACAACACCGCCTCA
ATTCGACGATCTTTGCGTGCCAACACTGAAGCTGAGGTGATCAAAGCCAATGGAGAAGCC
CTCAAGAAGTTTGCGCCGCTCGTAGCACAGATCCAGGCCAGTGGCAACACCATTGCTGAC
CTGAACCACAAGTTTACGCTCATGCAGCAGCTGGTGAACACATGTAAGAATGACACTCGA
CATGTGGTCTCGGAGGGATCGGAACTCATGGCACAGCAGGAGAACATTTCCAAGAAGCGA
GACTTGCTCAAAAGATACACTGATGCATTTGTTCTGACGGAACGCGAGATGGATATTTTG
AAGGGCAACGATGAGGTTCCCTTTGAGACGTTCAAACAGGTGTTCATCAAGGCCCAGAAG
ATCCACAAGGACTCGGAGATCCTGCTAGCCAACGACGACACGCGGGCCGGCCAAATCACA
ATGTACAAGGCCAACCAGGCTCTTGAAAACGCAAATAACACGTTGATTCGAGACACCGAA
ACGTCTCTCATTAATTACGCACAGTTGGGAGAGACAGACAACTTCAAGCAAGACCCTCAG
CTAAGGGAACGACTGTCTTTGCTCAATGACGTCAACCGAGCAAAGACCCTGGGCCAGTTT
ACAGAGACTAGACGACGACAACTACTCAAATCTTTCACCTCGGCACTTACAGAGAACTCA
CAGAAGAACGGAACAAAGGCCCTCGACTTTTACGCCTACGACTGCCAGAGATACATTGGA
GATATTCTCGCTTGGGTTTATTCTTGTGTCGTTCTGGAGACTGAAAACACATCTATTCTG
ATTGGACAGAACGATTCTGAGCTCGTGGATAACTGCACCCAGAGTCTGTGTTCACCCCTG
CGACTCAGAGTGGAGAGAGCAGTCGCATCACAAACACGAGGACCGCAAATATTCAAGATT
GCTGGTCTCGTGGAGTTCTACAAGTCAATGCTATCCAAGCATCTGCCAAACTCGCAGCTG
GTAGATACACTAACCCAACTGACGGCGTTCTGCAACACCCACTTCACCAAAACCTGCGAG
TCGCGTGTTCGAAACGTTTCTGTGTCTCTTCCCACAACCCTTTCTAGTGATTTGCAACCG
CCGGAGTTCCTCACCCAGACGCTTGTTGATCTCAAGGAGATTCTGGAGGCCAACCAGCAG
TATTCTTTGGACGAGCAGGTTGTTCGAAAACACATTGACAATTCCCTCGATCCCTACATG
GAGTTTTGTCGTCGAGTTGCCTCTGATGGAGCTGATTTTGATGCTGAAATCTTTCTGCTC
AACTGTTTGGACCAGATCATCATCACTCTTAAACTATATTCTGCTTCCGAATACAAGGTG
GACTCGTTCCAGTCTTCTGTGGATGAGATTGAGCAGGTGTTAACTGAAAGACTGTTCCAC
AAGTTTGTCAAGCAGGTTGGACTTGGTGAGGACCTTGAGCCTGCTCACCTGTCAGAGATT
TCGTTCCAGCTGGATGACTTCCTGCCGTCGGCGCTCACTGATTTGCATTCCATGCTGTTC
CGCATCTCCTCACCTGTTATTGTGGACAACATTGCTCGAAACTCGACCAAGAAGTTTGTA
GAGGAGTTCTCTAAGCTGGAGGGCAAGGTCAAGGACACGTACAAGGTTGAGAGCGACTAC
CGACAATTCTTTCCTCGAACTACCGAGGATGTCGAGCTGCTGTTGGGTCTGAGGAGTTAG
GGCGATTGTTATATTTCATTTGCATAATACAGGTAATGATAGATCTACGTATATGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F16467g_CDS-001

Protein length: 600 aa.
Product: Conserved hypothetical protein

>YALI0F16467g_CDS-001 METTVLQNKISRLLSTSYTDGGTRDALVALDDRITDNTASIRRSLRANTEAEVIKANGEA
LKKFAPLVAQIQASGNTIADLNHKFTLMQQLVNTCKNDTRHVVSEGSELMAQQENISKKR
DLLKRYTDAFVLTEREMDILKGNDEVPFETFKQVFIKAQKIHKDSEILLANDDTRAGQIT
MYKANQALENANNTLIRDTETSLINYAQLGETDNFKQDPQLRERLSLLNDVNRAKTLGQF
TETRRRQLLKSFTSALTENSQKNGTKALDFYAYDCQRYIGDILAWVYSCVVLETENTSIL
IGQNDSELVDNCTQSLCSPLRLRVERAVASQTRGPQIFKIAGLVEFYKSMLSKHLPNSQL
VDTLTQLTAFCNTHFTKTCESRVRNVSVSLPTTLSSDLQPPEFLTQTLVDLKEILEANQQ
YSLDEQVVRKHIDNSLDPYMEFCRRVASDGADFDAEIFLLNCLDQIIITLKLYSASEYKV
DSFQSSVDEIEQVLTERLFHKFVKQVGLGEDLEPAHLSEISFQLDDFLPSALTDLHSMLF
RISSPVIVDNIARNSTKKFVEEFSKLEGKVKDTYKVESDYRQFFPRTTEDVELLLGLRS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG