YALI0F16511g

Overview

Description some similarities with uniprot|W1QGQ4 Ogataea parapolymorpha HPODL_03402 XBP1 Transcriptional repressor
Locus type CDS
Locus tag YALI0F16511g

Location

Species Yarrowia lipolytica Positions 2212220..2214563
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2344 (nuc.)
Previous locus YALI0F16489g Next locus YALI0F16533r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F16511g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F16511gYALI0F16511g_mRNA-001YALI0F16511g_CDS-001

Nucleotide sequence

 

>YALI0F16511g
CCGACATAGCGAGCACCTCATTGTACGCCACGCCAAAGTTTATTTATCCACACGGTGAGT
CACGAGACGAGGGGAGGTGGGCATGACCAGCGGCAATATTTTTTGACAGAGGAGAAGAAA
CAAAAATATTGTCAGACCAGAATCAGTCTCTGCCGAGACTCGCTCGAGCCACACTAACTT
AGACATCTGGGGGAATAGATTGTCGACATCAAGATGTGAGTATTGGGTGGAGGACGGAGG
AGGCATGAGGAGGAGATGTGGATTCAAGAAAGGAATGAGAGAAAGAGAGGAGTGATGCAT
GAGGAGACTTTTCATCAGTGGGGAGAACATTGTTCCTTTTAAGGACATTGAACTCCACTC
AAATGTGTCAATTCCGTCTCTAAGCACTGTTGTGATGTGTGGACTTGACGCATCGCAACC
AAGTCAGCTGTATCAAAATGGCAGTGTGCAACTGGATGAGCTGACTAGTCGAGTGTAATT
AGAAATGAGATACCCCAGACAAACGAAACGCCGCAAATTATACCAGTCATCCGTACAATA
CAATCGACCCCACACGTCTGCAACAAAATAGGATCAACGAGTCCCCATTCCATGTTGATC
TCTCACTCTGCACCCAGGATAGAGACTTTGTGTCTTCGTCATGACCGTACTAACCCAGAT
GACAACTCAAGAACCCGGCTTTCTGGCCACCTCTTCGGTGTCGCCAGCCAACCGCGAATT
CCCAGTCTATGCTGTTAACTGGCCCATTTACACAATCCCATCATGTCTCATCATTCCCAA
TGATCAAAAGGAGCTGGTTCCTAGCCCCGAGTCCATCTCCAAAAAGCGATACGCCACTTC
TGTCGACGAGCGGAACTACCTTACCGTCTACGAGTACCAGATCAACAACCAGTGGATCAT
CTGGGACTACCACACTGGATACGTGCATCTCACTGGCCTCTGGAAGGCTATTGGAAACTC
CAAGGCAGACATTGTCAAGCTAATTGACAACTCACCGGATTTGGAAGCCGTCATCCGTCG
AGTGAGAGGAGGATACCTCAAGATCCAGGGAACATGGGTGCCCTACGACATTGCGCGAGC
GCTGGCCAGCCGAACCTGCTACTTCATTCGGTTCGCTCTAATTCCTCTGTTTGGACAGGA
CTTCCCCGGCACTTGTCTCAAACCCCATGAGCCTGGCTTCGGCTACCTTCAGATGCATTT
CAACTCCACGAAAAAGAGAAGAAAGAGCAACGCCAAAGCCCAGCAACAAGGACTCGCCCA
CGCAACCTCGCCCACACAGCACAGTCACCCCACGTCGCCATCGCACAGTCCCCACAGCCA
TATGATACACTCCCAGAGTGTACCCCATATGGCCCAGCACCACATGTCGCTGCAACAACA
TGTCGCACATTCACAACAGCAGCAGCAGCATCAGCATCACATGAATCATCAGCAGCACCA
CATGGTTCACTCCCATCATGTGAGCCATCCCCATCACATTCAGCCCATGCAAAGCCCGCG
CTACTACCCCATCCAGCCGGCCCAGCAACAGAATCAGGCGCAACAATCTCGACTTTCACA
GTCGGCCCCAGCTCACGTGTCGTACGCAGGCAGCCATAGCAACGTAACGCCCGTGCCTAT
CTCGCCGGCTCCCGCTGCTTCTGCCAGCAACCCCTACTACCACGTGACACCTCCGTCGCC
CCATTCACAGGCTGTGCTTCTGCCCCGCATCTCGTCTATGCCAAGTCCTCCTCAGCTGCC
CCACGCGACTCGAAAGTACTCCAACTCCAAGACTCGGCCCATTCTCATCCGACCCAACTC
GGATGATTGCGCGGTGAAGACAGAGGGTGATGAAGAGATGCTGAGCCAGCAACACACGCC
TCCTTATACCACGTATGTGAGCCGACGGCCCTCACTTGGAGGCATCGCAAAGCCTGGAAA
TGCGGTGCGGCCTCGACGCAAGTCGCGTCTTTCGTACGACGAGTCGCAGACCAGTTTATT
GAGCGCTGCTCTGAGAAGTTCCAGTTCAGTGTCGGGGTCTGCGGTCACTTGCTCGTCGTC
AGAGTCTGAGCAGGATGACGATGAGTACTACCGCAACTTCTTTGCTCGAAGGCAGTCCAT
CTCCGAATATAATCCCGCCAATCCTCCCAAGCAGGAGAGTCCTGAGGAGATCATGGAGGT
GCTGCAGGCCATTCGTTCGTTGCAGCAGCTCAGCACTGGCGGTGGGAAGCCTGGAGAAAA
GAAAGTGATGGACATCAACTCAGTGTTGAGTTAAGGGTATAATTTTGGGTAATATTGGCA
CCGAACAGACGTTTCGGTGGGTAACGGCGTAATTTATTTTGTTAATGTATTATTGGAGTA
CGGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F16511g_CDS-001

Protein length: 532 aa.
Product: Conserved hypothetical protein

>YALI0F16511g_CDS-001 MTTQEPGFLATSSVSPANREFPVYAVNWPIYTIPSCLIIPNDQKELVPSPESISKKRYAT
SVDERNYLTVYEYQINNQWIIWDYHTGYVHLTGLWKAIGNSKADIVKLIDNSPDLEAVIR
RVRGGYLKIQGTWVPYDIARALASRTCYFIRFALIPLFGQDFPGTCLKPHEPGFGYLQMH
FNSTKKRRKSNAKAQQQGLAHATSPTQHSHPTSPSHSPHSHMIHSQSVPHMAQHHMSLQQ
HVAHSQQQQQHQHHMNHQQHHMVHSHHVSHPHHIQPMQSPRYYPIQPAQQQNQAQQSRLS
QSAPAHVSYAGSHSNVTPVPISPAPAASASNPYYHVTPPSPHSQAVLLPRISSMPSPPQL
PHATRKYSNSKTRPILIRPNSDDCAVKTEGDEEMLSQQHTPPYTTYVSRRPSLGGIAKPG
NAVRPRRKSRLSYDESQTSLLSAALRSSSSVSGSAVTCSSSESEQDDDEYYRNFFARRQS
ISEYNPANPPKQESPEEIMEVLQAIRSLQQLSTGGGKPGEKKVMDINSVLS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG