YALI0F16313g

Overview

Description some similarities with uniprot|Q07794 Saccharomyces cerevisiae YLL002W RTT109 Histone acetyltransferase critical for cell survival in the presence of DNA damage during S phase
Locus type CDS
Locus tag YALI0F16313g

Location

Species Yarrowia lipolytica Positions 2182662..2184168
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1507 (nuc.)
Previous locus YALI0F16291g Next locus YALI0F16335g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F16313g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F16313gYALI0F16313g_mRNA-001YALI0F16313g_CDS-001

Nucleotide sequence

 

>YALI0F16313g
ATGAGTGATGGAACCAAAAGTCTAGTTGACGAACAGTTTGTGCGGGCGCTCGCAAAGGTT
CTTCCCAAGCTGCCCGGTGACTTTGTCTTCCACCACTACCATACTAAGAAGCGTCAGTGC
AAGCGGTCTCTCATTTTCCAGGACGATGTTCTCGATGGCTTTGACGAGGGAGATGATGCG
GAGGAGGCGAAGGCAGCCGATGAGTCAGCTGATAAGCCTACTGGGTCCACTGAATCCGAT
GAACTCGAGAAGCTACCTGAAGCAAAGAGAGAATCTGTTTCTGACTCTGGGACAACTGAG
GCCAAGGACAACGAACAGAAGCCTGTGACTGGGGTGGAGGAGGATGGAGTGGAGGAGGAT
GGAGTGGAGGAGGATGGAGTGAAGAAGGTATCCGAATCGGGTTTCAAAGGAGCTGGCTCT
TTGGATGGGGACAAGACCGCTTCTAAGTATACAGACGCCGCCGAATCCAAAACCATCAAA
ACTGTCCCCCCAGAGATCTTGGAACGACGAAAGAAACATACTGTGATCACCCACATGTTT
GTCTTGTCGTACGAAAATACCATTCTCTTCGCGCTCGAAATCTACACCTTTTACGATCCC
ACAGGAGTCACTCTGTTTGTTTCAAAGGCAGACACCACTGGCCAGTCTCCCCTGGTTGAC
GGCGAGTCTGTCCGAGTGTCGATGAAAGACGTTTCCAGAGCCATCATCGATGTGCTTCTC
AAGCATCATCCCGGCCAGCGGGTCCGTATCTGTCTTTTTGCCCGACCCGAAAAGCAATAC
CTTTTCCCTTTCTCGGCTGACTACCCCAAAAAGCATTTCCTCAGCGGCCCTCAGCTCACA
AAGTGGTGGATAGCCTGTCTGGACGGTCTCCTCGATGACTTTGAGAACCCCACTGCCACT
CTGCGTATCCCCGGCGCAGAAAACCGAACAATTCAGAGCTTCCTCGAGGGCCTTCCTAGA
TGGACCATGGGCGACATCTTCAAGTACCAGAAGCCCGAGGTCGGAGAAGTGCCTGAATCT
GACGCCAAACTCGCCATCTACCAACTCCCCCGGTTCCCTGATGACCCCAAATCTCGATTC
CTCGACTTTCTCGCGTCTGAAGGACGAACTACAACCTGCAGCATTGAAATGTTCTGGGAA
GAGATCCAGGGCCGCCAGGAGTTCAATGCCGGAATAATGGTCGGTCTAATGGGCGTTGAC
GGCGTTGTGAAGGGCGAAACACAGCCTGAAACCGAACCTGCATCTTCTCTGTCGTACAAG
GAGTTCAAAAACGTGCGAGAAATCATCACCGAGTCGGATTACACAACTACCGAACTCGTC
ATTGACGCCAACAGAGAACTAACTGAGGATGGACCAGCGCAGAGCCGTGTGGGCTTCAAG
GGACAGCTGGAACGAGCTGCTCCAGTAGCGTCGGAGCTCAAGCGAGCCCCCGTCGTCAAC
ACTCTCGACATGAACCTGGTTAGAAAGAAGAAGAAGACTAACTAACAGAATAAATATTAC
ATTCAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F16313g_CDS-001

Protein length: 495 aa.
Product: Conserved hypothetical protein

>YALI0F16313g_CDS-001 MSDGTKSLVDEQFVRALAKVLPKLPGDFVFHHYHTKKRQCKRSLIFQDDVLDGFDEGDDA
EEAKAADESADKPTGSTESDELEKLPEAKRESVSDSGTTEAKDNEQKPVTGVEEDGVEED
GVEEDGVKKVSESGFKGAGSLDGDKTASKYTDAAESKTIKTVPPEILERRKKHTVITHMF
VLSYENTILFALEIYTFYDPTGVTLFVSKADTTGQSPLVDGESVRVSMKDVSRAIIDVLL
KHHPGQRVRICLFARPEKQYLFPFSADYPKKHFLSGPQLTKWWIACLDGLLDDFENPTAT
LRIPGAENRTIQSFLEGLPRWTMGDIFKYQKPEVGEVPESDAKLAIYQLPRFPDDPKSRF
LDFLASEGRTTTCSIEMFWEEIQGRQEFNAGIMVGLMGVDGVVKGETQPETEPASSLSYK
EFKNVREIITESDYTTTELVIDANRELTEDGPAQSRVGFKGQLERAAPVASELKRAPVVN
TLDMNLVRKKKKTN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG