YALI0F16291g

Overview

Description highly similar to uniprot|P15180 Saccharomyces cerevisiae YDR037w KRS1 lysyl-tRNA synthetase, cytosolic
Locus type CDS
Locus tag YALI0F16291g

Location

Species Yarrowia lipolytica Positions 2179915..2181752
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1838 (nuc.)
Previous locus YALI0F16247r Next locus YALI0F16313g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F16291g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F16291gYALI0F16291g_mRNA-001YALI0F16291g_CDS-001

Nucleotide sequence

 

>YALI0F16291g
ATGTCTGATATTAAGGAAACTACCGAGGCTCTGGCCAAGACCTATCTCGACGAGGAGACC
GGCGAGCAGGTCTCCAAGTCCGAACTCAAGAAGCGACAGAAGCTTCGAGATCTGGCCCGA
AAGAAGGCCGAGAAGGCTGCCGCCCAGCCCAAGACCGAGAAGAAGGAGAAGGGCCCCAAC
GAGGAGGAGCTGACCCCCAACCAGTACTTTGAGATCCGATCTCGACAGATTGATGCTCTG
CGACAGTCCAAGACTCCCAACCCTTACCCCCACAAGTTCAACGTCACTACCAAGGTGGAC
GAGTTTGTGGAGAAGTACAAGGGTCTTGCTCGAGGAGAGATCAAGAAGGACGAGGAGGTT
TCTGTTGCTGGCCGAGTGCACACCCTGCGAGCTGCTGGCTCTAAGCTGCGATTCTACGTT
CTCCACCAGGAGGGCAAGACCGTGCAGATCATGGCCCAGGGCCAGGACAATGAGGGTGAC
TGGGGTATCCATGATCTGATCCGACGAGGAGATGTCATTGGTATCCGAGGTTACCCCGGC
CGAACCGAGCCCAAGAAGGGTGGTGAGGGTGAGCTTTCCGTCTTTTGCAAGGAGCTCGTG
CTGCTGACCCCCTCTCTGCATATGCTGCCTACCCACCAGTCTGGCTTTAAGGACGTTGAG
ACCCGATTCCGACAGCGATACCTTGATCTGATCATGAACGACTCCACCCGAGAGCGATTC
ATTGTGCGATCCAAGATCATCCAGTACATCCGAAAGTTCCTGGACAACAAGGACTTCATT
GAGGTCGAGACCCCCATGATGAACATCATTGCCGGAGGAGCCACCGCCAAGCCTTTCGTC
ACCCACCACAACGACCTCAACCTCGACATGTACATGCGAATCGCCCCCGAGCTGTACCTG
AAGCAGCTTGTGGTTGGAGGTATGGAGCGAGTCTACGAGATTGGCCGACAGTTCCGAAAC
GAGGGCATTGATCAGACCCATAACCCCGAGTTCACAACCTGTGAGTTCTACGAGGCCTAT
GCCGACGTCTACGACCTCATGGAGACCACCGAGCTGCTCTTCTCCGAGATGGTCAAGGAG
ATCACCGGAGGATACAAAATTGAGTACCAGCCCCAGGGCCCCGAGGGCGAGACTCTCACC
ATTGACTTCTCTCGACCCTGGAAGCGACTCGACATTATCGGCACTCTTGAGGAGAAGCTG
GGTGTCAAGTTCCCTCCTGGAGATCAGCTGCACACCGCTGAGACCAACCAGTTCCTGCAG
GAGCAGCTCAAGAAGGTCGGTCTTGTCTGCACTCCTCCTCTTACCAATGCCCGAATGCTG
GACAAGCTGATTGGCGACTACCTGGAGGACACCTGTATCAACCCCACCTTCCTGTACGGC
CATCCTGAGATGATGTCTCCTCTGGCCAAGTACTCTCGAGACCGACCCGGTATCTGTGAG
CGATTCGAGGTCTTTGTGGCCACCAAGGAGATCTGTAACGCCTACACCGAGTTGAACGAT
CCCTTTGACCAGCGACAGCGATTCGAGGAGCAGGCTCGACAGAAGGACGCCGGTGACGAT
GAGGCTCAGCTTGTTGACGAGACCTTCTGCACCGCCCTTGAGTACGGTCTGCCCCCTACT
GCCGGATGGGGTTGTGGTGTTGATCGACTCACCATGTTCCTGACCAACTCCAACACTATC
AAGGAGGTTCTTCTGTTCCCCGCCATGAAGCCTGAACAGACCTCCGATAAGAAGGAGCAG
CAGGAGTAGATAGCGAACGGAGTAGAGGCGGAAGCTGATGGCCAGAGGCCAGAGGCGGAC
AACAATATATGATTTGAAAGGATAAAGAGTATTATTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F16291g_CDS-001

Protein length: 583 aa.
Product: Lysyl-tRNA synthetase, cytosolic, putative

>YALI0F16291g_CDS-001 MSDIKETTEALAKTYLDEETGEQVSKSELKKRQKLRDLARKKAEKAAAQPKTEKKEKGPN
EEELTPNQYFEIRSRQIDALRQSKTPNPYPHKFNVTTKVDEFVEKYKGLARGEIKKDEEV
SVAGRVHTLRAAGSKLRFYVLHQEGKTVQIMAQGQDNEGDWGIHDLIRRGDVIGIRGYPG
RTEPKKGGEGELSVFCKELVLLTPSLHMLPTHQSGFKDVETRFRQRYLDLIMNDSTRERF
IVRSKIIQYIRKFLDNKDFIEVETPMMNIIAGGATAKPFVTHHNDLNLDMYMRIAPELYL
KQLVVGGMERVYEIGRQFRNEGIDQTHNPEFTTCEFYEAYADVYDLMETTELLFSEMVKE
ITGGYKIEYQPQGPEGETLTIDFSRPWKRLDIIGTLEEKLGVKFPPGDQLHTAETNQFLQ
EQLKKVGLVCTPPLTNARMLDKLIGDYLEDTCINPTFLYGHPEMMSPLAKYSRDRPGICE
RFEVFVATKEICNAYTELNDPFDQRQRFEEQARQKDAGDDEAQLVDETFCTALEYGLPPT
AGWGCGVDRLTMFLTNSNTIKEVLLFPAMKPEQTSDKKEQQE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG