YALI0F15961g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F15961g

Location

Species Yarrowia lipolytica Positions 2150130..2150879
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 750 (nuc.)
Previous locus YALI0F15939g Next locus YALI0F15983g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F15961g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F15961gYALI0F15961g_mRNA-001YALI0F15961g_CDS-001

Nucleotide sequence

 

>YALI0F15961g
ATGATCGACAAACTATTAGACCAGTACATTGGAGATGTGAGTTTTTCGAACGTTTATTCC
GCCGAGGAGCCGTGGAGTATCTACGACGAGTATCCTGAGATTCCGCCGCGTGTTCAACCA
GTGGAGAATTCTCTGATTGGAGACTTGGACAATTTCAGTCTCAGTGTACCTTCTGAGATT
TCTTTGGACGCGGGCGGTTTGGAAATCACGTCATCGGTCACCGTTGTCACCAAGAGAGCG
GACAGAGTTGCAGGCGGTCAGACTCTCTATGGAGACATTCTGGGGAGTTTGAGTGGTTTG
GATGGGTATGGGCAGGCTGGTTCAGAGAGAACTCATCAAGTGACACTGGAGAAGTCGACT
GAAGCAGATGGGCTGGGTAAGAGCGTGTTGGAGGAGCTGTCTGAGGAAGAGAAGTTTGAG
GCCACGAAGGTCAAGGGCGAGGAAGAGTTAGTACAGGACACGGACAAGGTGTTTGGAGCT
CCCGATCTCGCCATTTACAAGAAGCGGTTTGCCTACGGCGAGAAACTTGTGCTGGCCGAA
CTCAGAGCTAGGAAGAAGAGGTTGAAGCAACTTATTGAGCGCATCTCGGCAACCAAATCC
AAGCGGGAGAGAGAAAGAACCAATATCCAGCTTTCCCTGTCGCCTTTTTATGCCTGGGCC
GACGAAGATGAGTTCGATGAGGAGCTTGCCCGCTGGGATGGAAGTTATGATGATATTAAC
GCTAGTAGTGGTATAAGAAGAGGTATTTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F15961g_CDS-001

Protein length: 250 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F15961g_CDS-001 MIDKLLDQYIGDVSFSNVYSAEEPWSIYDEYPEIPPRVQPVENSLIGDLDNFSLSVPSEI
SLDAGGLEITSSVTVVTKRADRVAGGQTLYGDILGSLSGLDGYGQAGSERTHQVTLEKST
EADGLGKSVLEELSEEEKFEATKVKGEEELVQDTDKVFGAPDLAIYKKRFAYGEKLVLAE
LRARKKRLKQLIERISATKSKRERERTNIQLSLSPFYAWADEDEFDEELARWDGSYDDIN
ASSGIRRGI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG