YALI0F15939g

Overview

Description weakly similar to uniprot|P32591 Saccharomyces cerevisiae YJL176c SWI3 transcription regulatory protein
Locus type CDS
Locus tag YALI0F15939g

Location

Species Yarrowia lipolytica Positions 2147211..2149903
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2693 (nuc.)
Previous locus YALI0F15917g Next locus YALI0F15961g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F15939g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F15939gYALI0F15939g_mRNA-001YALI0F15939g_CDS-001

Nucleotide sequence

 

>YALI0F15939g
ATGTTTTCCGAGGGAGATTTTGGAGCCGGCGGCAGCGCAGACGCCCCCAATGGCGCCCCC
ACGTCGACCGATGGCGTCTCCAGTGCCGCTGCGCCCGTCGACGACCTCAATACGACCGAC
AACAATTCCATCACAGAGCCCACTACCGCAACCTCAGCGACTTCCAACACCGAGGCCACG
GCTGAGTCGATGGAGCATGCCGAGCCCGTGATTCATGCTGACGTGGCAGGTGGTGATGAG
CCTGCCCCCGATGTTGATGCTGTTGCTGACACTGCACCCGTTGAACCTCCTGCGGGTGCT
GATACTCCTGTTGACGCTACGGCTCCTGTGGAGACCACCACCACCACCACCACCACCACC
ACTGTGACCGAGGAGCCCGCCACAGACACAATTAACGACGGTGCTGTTGTTACAGAGACC
ACCTCTTCCACTACCGAGAGTCTTCCTGCTGCTGAGGGTGCTACTACTGCCACTGACACT
GCTGAAGAGGCCGCAAACGGTGCAGATGCAGATGGTGCAGCAAACGGTTCCAGCTCTGAA
CCCAAGCCTGAGACCTCTGAGCCTGCTGCTGCCACGTCACCTGCACCGGCACTGCCCTCA
GATGGTATGGATGTAGACTACATGCCTGCGGACCAGGACGACAAGGAGGATGACTGGAAC
ATGGACCTGGAGCCTGAGTGGGAGGCCACCGGTGGAATCGCCGAGACCACCAAAGTCGAG
CCCAAAGCCTCCGCAGAGCCCAGGGACGACAAGGAGGCTGACTCGGAGATGCTTGACGCA
GACACAGCCATCCCCGACGACCAAAAACTCAAGGAGACCAAGCCCGTGGTCGCCCCACCA
CCCGTGCCCCGAAACGCGGTGCCCGATTACATCCCCCAGGCGCACACTATTGTGATCCCG
TCTTACGCCAGCTGGTTCAACGTGAACCGCATCCACTCGATAGAGAAGAAATCCATTCCC
GAGTTCTTCAATCAGCGCAACAACTCTAAGACACCTGAGGTGTACAAGCGGTACCGTGCT
TTCATGATCAACACCTACCGACTGCACCCCACGGAGTACCTAACTGTGACTGCTGTGAGA
CGAAACTTGCTAGGCGACGTGTGTGCCATCATGAGAGTGCACCAGTTTCTCGAAAAGTGG
GGTCTCATCAACTACCAGGTTGATATTGAGGCCCGACCCCAAATGGTTGCCCCTCCCTTT
ACAGGCCACTGGGAGGTGACTGAGGACATGCCACGTGGTCTGTTCCCCTTCCAGGCATAC
AGGGGCACTCGTTTCCTGAAACGGGCTGGCGAGAACGGCTCCATCGAGGAGGGTGGCTCG
ATTGAGGCCAAAAAGCCGAAGGTGGAGGGTGATGATACTGCCGATGCTGTGGATGGTGGC
AACAGCAACGACAACAAGGATACCAGCAGTAAAGAGGGTGGGGCCGAGGTAGGCACCCAG
GGCGACACAGTGCGAGTCAAACCCGAACCCACAACTCCCCAGGTTGAGCCATTTGTGCAG
TCCGATCCCGAATGGACTAAGCGGGAGGTGTACAACCTGCTCAACGGTATCGAGGAGCAT
GGAAACGACTGGACCGCCATTTCCGAGACAGTCGGCAACAAGACCCGGGAGCAGTGTCTG
CTCAAGTTCATCTCCTTGTCTACCGAAGACAAGTATCTGGGCAAGAGTGGCGATGTTTCA
GCGTCTACATCTGGCCAGGACATCAAGGTGTCTCCTCTTCAGGTGAGTCCCAAGTACCTG
CCGTTTGACCATGTGGATAACCCTGTTTTGTCGGTGGTTTCGTTCCTGACTGGTCTTGTG
GACCCTACTGTGGTGTCTGCCATGACCGGTCGAGGTGTGGAGGAGATTCGAAAGACCCTC
AAACTCGAAATGACTGAGCAAAAGAAGCAACAGCTGCTGGAGCGAAGACGAAAGCGAGAG
CAGGAAAAGAAGGATAAGGAGGCTGCTGCTGCCAAAGATGGTGACAGTAAGGACGGTGGG
GAGAAGGAAGGTGGAGAAGGAGATAAGGACGACAAGGACGCCGTCAAGGAGGAGGGTTCT
GATGATGACCCAGCTCTGTATCCCCCGGGAGCATCTGACTCTACCGATGCCGGCACCTCC
ATCAAGGACGTGCCTCTTGAGACGCTCACGTCGCTGGGCTACTCTACCCTGGGCACCAAG
GCGCAGGTCTTTGCCGACTTTTCCGAGAAGGAAATGTACCGGGACATGTTTGAGCTGACC
AAGGCGCAGGCCACAAAGATGGAGATGAAGATGGAAAAGTTTGCCGAGTTGGAGCGCATC
ATCGAGATGGAGCGACGGCAGCTGCAGATGGAGCGTGAGCAGGTGTTCCTGCAGCGTCTG
CTGCTCAACAAAAAGGTGTCGCAGGTGGACAATCTGCTTACACAGGCTGCTGAGGAGACC
AAGAACCAGCAACTGATTGACCAGGCCCGTTCCATTGTGCGGGGAGCCACCAAGCTGTCG
TTTGCACCTACTGTGCAGGACCAGGCGCTGGAGAACAGTTGTGTGGAAAACTCGCTGGAC
AATGTCACTCCTGTGACCCAGAAGAAGCAGACCTTTACTTTCTGGCAGGCTTAGGTCTAG
GGAGACAGATGAGGAGGAATACAGGGAGGCGTGTTGCTAACGGTGAAGATGGTTGTATAT
TAATAAATTGTTTAATTGATGTCAAGAGAGGAGCGAGAACTCACTTGGCTATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F15939g_CDS-001

Protein length: 858 aa.
Product: Conserved hypothetical protein

>YALI0F15939g_CDS-001 MFSEGDFGAGGSADAPNGAPTSTDGVSSAAAPVDDLNTTDNNSITEPTTATSATSNTEAT
AESMEHAEPVIHADVAGGDEPAPDVDAVADTAPVEPPAGADTPVDATAPVETTTTTTTTT
TVTEEPATDTINDGAVVTETTSSTTESLPAAEGATTATDTAEEAANGADADGAANGSSSE
PKPETSEPAAATSPAPALPSDGMDVDYMPADQDDKEDDWNMDLEPEWEATGGIAETTKVE
PKASAEPRDDKEADSEMLDADTAIPDDQKLKETKPVVAPPPVPRNAVPDYIPQAHTIVIP
SYASWFNVNRIHSIEKKSIPEFFNQRNNSKTPEVYKRYRAFMINTYRLHPTEYLTVTAVR
RNLLGDVCAIMRVHQFLEKWGLINYQVDIEARPQMVAPPFTGHWEVTEDMPRGLFPFQAY
RGTRFLKRAGENGSIEEGGSIEAKKPKVEGDDTADAVDGGNSNDNKDTSSKEGGAEVGTQ
GDTVRVKPEPTTPQVEPFVQSDPEWTKREVYNLLNGIEEHGNDWTAISETVGNKTREQCL
LKFISLSTEDKYLGKSGDVSASTSGQDIKVSPLQVSPKYLPFDHVDNPVLSVVSFLTGLV
DPTVVSAMTGRGVEEIRKTLKLEMTEQKKQQLLERRRKREQEKKDKEAAAAKDGDSKDGG
EKEGGEGDKDDKDAVKEEGSDDDPALYPPGASDSTDAGTSIKDVPLETLTSLGYSTLGTK
AQVFADFSEKEMYRDMFELTKAQATKMEMKMEKFAELERIIEMERRQLQMEREQVFLQRL
LLNKKVSQVDNLLTQAAEETKNQQLIDQARSIVRGATKLSFAPTVQDQALENSCVENSLD
NVTPVTQKKQTFTFWQA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG