YALI0F15983g

Overview

Description highly similar to uniprot|O93968 Candida boidinii Formate dehydrogenase
Locus type CDS
Locus tag YALI0F15983g

Location

Species Yarrowia lipolytica Positions 2151540..2152709
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1170 (nuc.)
Previous locus YALI0F15961g Next locus YALI0F16005g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F15983g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F15983gYALI0F15983g_mRNA-001YALI0F15983g_CDS-001

Nucleotide sequence

 

>YALI0F15983g
ATGAAGGTCCTTCTTATTCTCTACTCTGCCGGTTCTCACGCCGTTGACGAGCCCAAGCTA
CTCGGTTGCACTGAGAACGAGCTCGGTCTCCGAAAGTGGCTCGAGTCCCGGGGCCACACG
CTTGTGACCACCTCTTCAAAGGAGGGAGCCGACTCTGTGCTCGACAAGGAGATTGTCGAT
GCCGACATTGTCATCACTACTCCCTTCCACCCCGGTTACATCACCCGAGAGCGAATCGCC
AAGGCCAAGAACCTCAAAATTTGCATCACTGCCGGTGTTGGTTCGGACCACGTCGATCTT
GATGCTGCCAACGAGCGAGATATTGCCGTTCTCGAGGTCACTGGCTCCAACGTGCAGTCT
GTGGCTGAGCACGTTGTCATGACCATGCTGGTCCTGGTCCGAAACTTTGTGCCTGCCCAC
GAGCAGGTCATGGCTGGTGGCTGGGACGTTGCTGCTGTCGCCAAGGACTCCTACGACATT
GAGGGAAAGGTCATTGGTACTGTGGGAGGTGGCCGAATTGGTCAGCGAGTCCTAAAGCGA
GTTGCTCCCTTCAACCCTAAGGAGATGCTCTACTACGACTACCAGGGTCTGTCTGCTGAG
ACCGAGAAGGAGCTGAACTGCCGACGAGTCGAGAAGCTCGAGGATATGCTTGCCCAGTGT
GATATCGTCACCATCAACTGTCCCCTCCACGAGTCCACCAAGGGTCTCTTCAACAAGGAG
ATGCTCTCTCACATGAAGAAAGGTGCCTGGCTTGTCAACACCGCTCGAGGAGCCATCTGT
GTCAAGGAAGACGTTGCTGAGGCTCTCAAGAACGGCCAGCTGCGAGGCTACGGAGGTGAC
GTCTGGTTCCCCCAGCCTGCTCCCGCTGACCACCCCTGGAGATCCATGCGAAACAAGTAC
GGAGCTGGAAACGCCATGACCCCCCATATCTCCGGTACTTGCATCGATGCCCAGGTTCGG
TACGCCCAGGGAACCAAGAACATTCTCGACATGTTCTTCTCCGGTAAGCAGGACTACCGA
CCCCAGGACATCATCTGCATCAACGGTCACTACGGAACCAAGGCCTACGGTGATGACAAG
GAGCATGCTAAAAAGTAGGCTGGACGTCGAAATAAACACATTGTTCATCTCTGGGTAGCC
CAATAGTAAATAGGTAAGCTGTGATCATTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F15983g_CDS-001

Protein length: 366 aa.
Product: Formate dehydrogenase, putative

>YALI0F15983g_CDS-001 MKVLLILYSAGSHAVDEPKLLGCTENELGLRKWLESRGHTLVTTSSKEGADSVLDKEIVD
ADIVITTPFHPGYITRERIAKAKNLKICITAGVGSDHVDLDAANERDIAVLEVTGSNVQS
VAEHVVMTMLVLVRNFVPAHEQVMAGGWDVAAVAKDSYDIEGKVIGTVGGGRIGQRVLKR
VAPFNPKEMLYYDYQGLSAETEKELNCRRVEKLEDMLAQCDIVTINCPLHESTKGLFNKE
MLSHMKKGAWLVNTARGAICVKEDVAEALKNGQLRGYGGDVWFPQPAPADHPWRSMRNKY
GAGNAMTPHISGTCIDAQVRYAQGTKNILDMFFSGKQDYRPQDIICINGHYGTKAYGDDK
EHAKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG