YALI0F13343g

Overview

Description weakly similar to uniprot|P08964 Saccharomyces cerevisiae YHR023w MYO1 myosin-1 isoform (type II myosin) heavy chain
Locus type CDS
Locus tag YALI0F13343g

Location

Species Yarrowia lipolytica Positions 1788753..1795084
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 6332 (nuc.)
Previous locus YALI0F13321g Next locus YALI0F13354g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F13343g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F13343gYALI0F13343g_mRNA-001YALI0F13343g_CDS-001

Nucleotide sequence

 

>YALI0F13343g
ATGACCAACAATCTCGAGGCGGAAAACGCCGAATTTGCCGCCAAAAAGTGGGTGTGGGTG
GCCGACCCGACCGTGGGCTTCATCAAGGGCTTCGTGGTCTCCGAGGAGGGTGACAATTAC
ACCGTCAACTGTGGAGATGAGGTGAGTTTGTTGTGGTGACGATGGCATTGGCAAGCAATT
TTCGCAGAGGAAAACTAACACAGAACCGCGTGGTCAAGATAAATGACACAGACAAGGTCA
ACCCACCAAAATTCAACATGGCCAGCGACATGGCCGAGCTCACGTTTCTGAGTGAAGCTG
CCGTCATTGCCAACCTAGCAAGCAGATACAAGAGTGACATGATCTACGTGAGTACAGAGC
CACCCGAGAACCGCCGGAGGCTGACGCCTCTGAACAGCTGGGCCTTCTAACACAGACATA
CTCTGGGCTTTTTTTGGTGGCCATCAACCCCTACAGATCGCTCCCCATCTACGACAAAGA
CACCATCAGGAGCTACCGCAACAAGCACAGAGACGAGGTGCCTCCGCACATTTTCGCCAT
CACCGACCTGGCGTTTCAGAACATGATGGAGGCTCATGAGAACCAGTCGATTCTGGTGAC
GGGAGAGTCGGGAGCAGGCAAGACTGAGAACACAAAGAAGGTGATTCAGTACCTGGCGGC
CGTGGCTCAGGAGGGCAAGCATGCCTCTGCCGACGACTGCACGTTTGAGGACAAGATTTT
GCAGGCTAATCCGATTCTGGAAGCGTTTGGAAACGCCCAAACTGTGCGAAACAACAACTC
TTCTCGGTTCGGAAAGTTCATTCGCATCGAGTTTGAGCGAGCTGGCGCCATTGCGGGAGC
TGTGATCGACTGGTACCTGCTGGAAAAGTCTCGAGTCATTTCACAAAACTCTCGTGAGCG
AAACTACCATGTCTTCTACCAGCTTTTGTCTGGAGCCAGCGCGGAGCTCAGAGAACAGTT
GCTGATCAAAGACAGTGTCAACCCTGCAGACCACTCGTATCTGAAGGGCAGCAACTACGA
GATCCCCGGTGTCAACGACAAGGCCGAGTTTGGTGTGCTGCAAAAGTCTTTCCAGATCAT
GGGCTTCACCGACAAGGAACAGCATTCCATTTTCCAGACCCTTTCTGCTATTCTCCATTT
AGGTAACATTGAGCTAGCAGGCGAAGGCACGCGAGGTAGTGGAGTCAACCAGGCTCGCCT
CGTGGACATTTCGCAGGCTGAGCGCTTGTGTCATCTGCTCGGAATCTCTACCCAGCAGTT
TGTCACCTGTCTTTTGCATCCCAAGGTGAAGGCTGGCCGCGAGTGGGTCCAGCAGAACCG
GTCGACCGAGCAGGTACGGTTTTCGCTCGACTCACTGGCCAAGTCGCTTTACGAACGAAC
CTTTGGGTTTATCGTCGACCGAATCAACACATGTCTCCAGAGCGGCGCCTCAGATACCCA
ATTTATCGGCGTTCTGGATATTGCAGGTTTCGAAATCTTCCAGGTCAACTCGTTCGAGCA
GCTGTGCATCAATTACACCAACGAGCGGCTCCAGCAATTCTTCAACCACCACATGTTTGT
GCTTGAACAAGAAGAGTATGCTCGAGAGAACATTGAGTGGAAGTACGTCGATTTTGGACA
CGATTTGCAACCCACCATCGATCTCATTGAGAAACCCAACCCCATCGGTATCTTCTCGTG
CCTTGATGAAGATTGTGTAATGCCCAAGGCATCCGACAAGACCTTCACCGAGAAGCTGCA
TCAGCTGTGGGACAAAAAGTCGCCCAAGTACAAGTCATCGCGGCTCAAGCAGGGCTTTGT
GCTCACTCACTACGCTGCTGACGTTGAATATTCAACCGAGGGGTGGCTGGACAAGAACAA
GGATCCTCTTAACGCCAATGTGATTGAGCTTCTGGTGGAGTCTTCCGACTCCCATATTCG
ATGTCTGTTCCAGGAGGAGGCCAAGGAGGCCGCTCGAGAGACTTCAGCTAGAGGCAAGGG
AGGCAAGAAGGGAATCTTTAGAACGGTTGCTCAGAAACACAAGGAGCAGCTGAACTCATT
GATGACCCGGCTGCAGGCCACACATCCACATTTTGTGCGATGTATCATTCCCAACCACAA
GAAGCAGCCGCAGTCGCTGGATTCTCTACTTGTATTGGATCAGCTTCGATGCAATGGTGT
ATTGGAAGGTATTCGAATCGCCCGGTCTGGTTTCCCCAACCGTCTGCCATTTTCAGACTT
CAAGTCGCGGTACCAGGTGCTTGTTCCAATGCCCCAAGGTTTTATGGACGGTCAAAAGGC
TTGTCAGCACATTCTGTCCGGTCTCAAGATGGACACCAATCTCTATCGGGTTGGTCTGAC
TAAGGTGTTTTTCAAGTCTGGCGTTCTTGCCGAGCTTGAGGAGCAGCGAGAGTCGTGTGT
TCGAGATGTGATTGTGCGCTTCCAGTCTCTTGCCCGAGGCTGTATGACTCGACGAAAGTT
CCTCAAGGCCCAGCACAGACACGAGGCTGCTCTTATTATCAAGAAGAACCTTTCTGTGTA
CCGACACCTCAAGGACAACAAGTGGTGGAAGCTGTACGTCAAGATGCGGCCTCTTCTCGC
AACTTCCAAGGACATTGTTGAGCGACGTGCCAAGGATGCCGAGGTCAAGCGTCTGGAAAA
GAAGATGGCCGACATTGTGGAGACCAGAGACAGTCTTGATGAGCGGTGTCGGAAGGCCGA
GACTGAGCTTGCCAAGATTGAGGAGAAGCTTACCTCTGAGCGAGCCACAGCTGCCGACAA
GGACGAGATTCTCAGGAGGTCACAGGAGAAGGAGGCTGAGCTTTCCGCTCAGTTAGAAGA
GGCCTACGAGGATTTGGACCAGCTGGAGACCCAGATGGAGGAGCTTCTGGCTGCTAAGAA
GCGAGCTGATGAGCAGACAGACACTCTCAAGAAGGAGCTTGACAATGGTGCCAAGTTGCT
GAGCAAGCTGGAGTCTGAGAAAACAGATCTGGCCACCAGTATGGCGTCGATCGAGAAGGA
GCTTGCCGAGGCCACTGAGAAGCACTCTAACCGTTTGACCGAGTCCGAGTCACTCAACGA
ACAGCTTTCCATGATCCGAAACTGCGTTGCCATGCGAGAAGCCAAGATTGAGGAGCTAGA
GAGTCGTCTGGAAGAGTCGGAGAAAGAGCTGGGGTCTCGTCTTGCTGCTGCGACTTCTGG
TTTTGATTCTGCCAACAGACGGATCCGAGAACTCATCCGTGAGAACAAGGAAGTCCGAGA
CCAGCTGGCAGACCTGCATGCCACGTCGTTCGGCTATGAGAAGCTTGTGCGCAAGAAGGA
ACAGGAGCAGGCAGTGCTCAAGGCCGATCTGGACCGTCACGTGAAGGACCTGGAGGACAT
TTCTCGGCAGAAGCAGTCTCTTGAAACAAAGCATGAGTCTGTCTCTGCTGAGCTGGCTGC
TGCCAACGAGGAAATCAAGACTCTGTCTGCCAACCACGAGCAGCTCAAGCAGGAGCTGGA
GACTCGTCGACAGGAGTCTGAGAGCGAGGAGAAGCAAAAGGCGGCCCAGATGATGCTCGA
GACCGAAGCTCTCAAGGAGGAGCTGGCCAAGGAGCGTCGTCGACGAACCGTGGCTGAGTC
TGAGGCTTCCAAGACTCAGAACGAGGTGTCTCGAGTCAAGTCTGAGCTCTCTGCCAAGTC
TTCTGAGGTTGAGGGTCTTCAAAAGTCGAAGCAGTCGGCTGACAAGGAGGTCAAGCGACT
TCAGAGCCAGGTCGAGAAGGCCCAAGCCGCCCAGAGTGCTGCTGAGCGGGCTCTTTCAAA
GGTTGAAGCCGATCTCAAGGTGGCCCAGGACGAGGCAGCGCATCTGACGCGTCAGGACAA
GTCTCGCGAGCTGTCTCTCAAGTCGCAGGTAGAGAGTCTGAGAAACGAGAGTGCAAAGCA
TCGCACTTTGAACGAGGCGCTCACTGCTGATGCTGGTTCGTTCAAGACTCGTCTGGACGC
TCTAGCAACTGAGAAGAAGGCTCTGACTTCTCAGATTGCCACTCTCACTTCTGCTTCTGG
TGCCGATAAGGACCAGCTGGCTGTTCTGCGAGAGGCTATTGATGTCAAGAACAACCAGCT
GACCAAGCTGCGTTCCCAGGTCGAGGCTGAGACTCAAGCTCGTCTGGCTCATGTCTCTCA
GTCGTCTCAAGAGAAGCAGCAGTCCGATGACCATGTGGCATCTCTCAAACGAAAGCTGTC
TGAGCTGGAGACTGTGTACAGTACCGGCGAGAAGCAGCGAGAGCGAATGGCCAGAGAAAT
CGAGGATCTCAAGCATCACAACACCCAGGACCACAAGTCTGCTTTGTCGCAGGAACGGCT
GGTGACCGAGCTCAAGGCTGCTCTTGAAAAGGAGCGACGAGAGCGATCCGAGACTGCTGT
TCTTCGCCGCAAGTTGCAGAGCCAGGTTGATTCCTTGACTGAGACTGTGGAGCTTCGAAC
GTCTCAGGTTACTGCTCTTAACCGAGCTGTCCTTGGTCCAAACAAGCCCCTTCCTTCCGA
CCCCGAGTCTCTGGAGAAAGCTATTTCGTCCACTGTTGATCTTGCCACCCGCCTTGAAGA
GTCTGAACGTCGATGCAAGGCTCTTCAGGATGGCAAGCAGCTTGCAGAGGAGCAGTTCCG
AAGTGCCAAGCAACGATGGTCTGCTGATACCGACAACCTGTCTTCTCGACGATCGCATGA
GGACATCAACCTGACCTCGTACACTTCTCCCTCCAAGACCAAGCGTCCTCTTTCTGTTTC
TGCTGTGTCTCATCTCAACAGAGACTCCAATGGAATGGATGCCAAGTTGAAGGAGAAGCT
TGCTGCTGCTGAGTTAGCGCTGTCCCAAGCTCTTGCCAAGAACAAGCTTCTGGCCAAGGA
AGCTGAAGAGGCACGAAGCCGATCTCATGTCTCTGCCCGAGACATGTCTCCCGAGCGTCC
TTCCAGTAAGGCTTCTATCTCCAGCAAGCCTGACATGAACTTCCAGCTTGAAGCCGAGCG
GTCTCGAAACCGTGATCTTCAGGAAGATCTGCAGCTGTATAGACAGCGGGCCGAGGAGTA
TTACGGTAAGATTGAGTCTGCCGAGATTGCGATTCTCAAGTCGTCTCGAGCAGAGGAGTT
TGCCAAGCAGCGGTGCCAGGAGGCTGAGAGCGAGCGATCACAGCTTCTGGCCGAGCGTCA
AAAGGCCGAGACTGCTCTGATTGAGCTGCAGGCTGAGGTTCGGGGTCTGGAGAACCAGCT
GGAGGACAAGGAGATGGAGGTGGCGACTCTTCGGCGGTCCCATAAACGATTGGAGACCGA
ACAGGGTCGGGGTCTTGAGGGTTCTAAGAGCGAGCTGGCTGAGCTGACCAAGACTCTGGC
AGCCGAGACCAAGAACGTGTCTTCCCTAAGACAGCAAAACATGATGCTGCAGCAGCAGAC
TGATGCTATGAAGCGTCAGCGGGAGCTTGAGCAGTCCGAGGCCAAGCAATGGCGCGACGA
GCACGACCGGCTGGCTGCACAGGTGCACGACCTTCAGCAGCAGGCCCAGGCTGACGAAAA
GGCCAACTCCGAGGCCCAGAAGCGGGTTGCTTCGCTGCTGTCTCAGGTTCAGAATCTGCG
AACCACCATGGACGAGATTGCCACTGACAGAGACCAGCTGCTCAAGGACAAACGAGCTCT
TGAAAGCCGTGTGTCTACCATGGCAGTTGATCTCGAGAGTCTTCTAAAGAGCCACGGTGA
GACGCCTCTCTCTCGAACCTCCTCTCAGGTGTCTTCCACGCAGCTTCGAACTGCTGAGAA
GTCTGCTGCCGACGCTCTGGCCGCTCTGGAGCGTGAGCGCAGGGTGATGCAGACTCAGAA
GCGAGAGTCAGAGCAGCAGACCAAGGAGCTCAACCTCAAGATTCTCGATCTCGAGTCAAG
ACTTTTGTCTTCTGGAGGAGGGGATACCGAGGCCCTCAGAAAGCGGGTGTCTCAGCTCGA
GAAAGAGCTCCAGCAGCAGCAGTCGGATATGCTTGCTGACCTCAAGTCGTCTCGAGGAGG
TGACCGTCAGGCACGTGAGCTCCGGGATCAGCTTGATCAGCGTGACCAGCTGGTAAAGCG
ACTGCAGGAGGAGTCTGCCAAGTCGGAGGCCAAGGTGAACCGACTGGTGGAAGCAGTTGA
GAAGGCACAGGGAAGCGAGTCGCAGTACCAGGTGGTGGCTCGACGGGCAGAGCGAGAGTC
TAGAGAGCTGCGAGAAAAGTCTCTACGGCTGGAGAAGGATTTGGAGAACTGGAAGTCACG
GCTGGAGGCGTACGTCAACAACAACTCCAACTTTGAGCCCTCCTTTGTTTAATCGTTCAT
TTCATTTATATTTAAATACATTATACCCATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F13343g_CDS-001

Protein length: 2054 aa.
Product: Conserved hypothetical protein

>YALI0F13343g_CDS-001 MTNNLEAENAEFAAKKWVWVADPTVGFIKGFVVSEEGDNYTVNCGDENRVVKINDTDKVN
PPKFNMASDMAELTFLSEAAVIANLASRYKSDMIYTYSGLFLVAINPYRSLPIYDKDTIR
SYRNKHRDEVPPHIFAITDLAFQNMMEAHENQSILVTGESGAGKTENTKKVIQYLAAVAQ
EGKHASADDCTFEDKILQANPILEAFGNAQTVRNNNSSRFGKFIRIEFERAGAIAGAVID
WYLLEKSRVISQNSRERNYHVFYQLLSGASAELREQLLIKDSVNPADHSYLKGSNYEIPG
VNDKAEFGVLQKSFQIMGFTDKEQHSIFQTLSAILHLGNIELAGEGTRGSGVNQARLVDI
SQAERLCHLLGISTQQFVTCLLHPKVKAGREWVQQNRSTEQVRFSLDSLAKSLYERTFGF
IVDRINTCLQSGASDTQFIGVLDIAGFEIFQVNSFEQLCINYTNERLQQFFNHHMFVLEQ
EEYARENIEWKYVDFGHDLQPTIDLIEKPNPIGIFSCLDEDCVMPKASDKTFTEKLHQLW
DKKSPKYKSSRLKQGFVLTHYAADVEYSTEGWLDKNKDPLNANVIELLVESSDSHIRCLF
QEEAKEAARETSARGKGGKKGIFRTVAQKHKEQLNSLMTRLQATHPHFVRCIIPNHKKQP
QSLDSLLVLDQLRCNGVLEGIRIARSGFPNRLPFSDFKSRYQVLVPMPQGFMDGQKACQH
ILSGLKMDTNLYRVGLTKVFFKSGVLAELEEQRESCVRDVIVRFQSLARGCMTRRKFLKA
QHRHEAALIIKKNLSVYRHLKDNKWWKLYVKMRPLLATSKDIVERRAKDAEVKRLEKKMA
DIVETRDSLDERCRKAETELAKIEEKLTSERATAADKDEILRRSQEKEAELSAQLEEAYE
DLDQLETQMEELLAAKKRADEQTDTLKKELDNGAKLLSKLESEKTDLATSMASIEKELAE
ATEKHSNRLTESESLNEQLSMIRNCVAMREAKIEELESRLEESEKELGSRLAAATSGFDS
ANRRIRELIRENKEVRDQLADLHATSFGYEKLVRKKEQEQAVLKADLDRHVKDLEDISRQ
KQSLETKHESVSAELAAANEEIKTLSANHEQLKQELETRRQESESEEKQKAAQMMLETEA
LKEELAKERRRRTVAESEASKTQNEVSRVKSELSAKSSEVEGLQKSKQSADKEVKRLQSQ
VEKAQAAQSAAERALSKVEADLKVAQDEAAHLTRQDKSRELSLKSQVESLRNESAKHRTL
NEALTADAGSFKTRLDALATEKKALTSQIATLTSASGADKDQLAVLREAIDVKNNQLTKL
RSQVEAETQARLAHVSQSSQEKQQSDDHVASLKRKLSELETVYSTGEKQRERMAREIEDL
KHHNTQDHKSALSQERLVTELKAALEKERRERSETAVLRRKLQSQVDSLTETVELRTSQV
TALNRAVLGPNKPLPSDPESLEKAISSTVDLATRLEESERRCKALQDGKQLAEEQFRSAK
QRWSADTDNLSSRRSHEDINLTSYTSPSKTKRPLSVSAVSHLNRDSNGMDAKLKEKLAAA
ELALSQALAKNKLLAKEAEEARSRSHVSARDMSPERPSSKASISSKPDMNFQLEAERSRN
RDLQEDLQLYRQRAEEYYGKIESAEIAILKSSRAEEFAKQRCQEAESERSQLLAERQKAE
TALIELQAEVRGLENQLEDKEMEVATLRRSHKRLETEQGRGLEGSKSELAELTKTLAAET
KNVSSLRQQNMMLQQQTDAMKRQRELEQSEAKQWRDEHDRLAAQVHDLQQQAQADEKANS
EAQKRVASLLSQVQNLRTTMDEIATDRDQLLKDKRALESRVSTMAVDLESLLKSHGETPL
SRTSSQVSSTQLRTAEKSAADALAALERERRVMQTQKRESEQQTKELNLKILDLESRLLS
SGGGDTEALRKRVSQLEKELQQQQSDMLADLKSSRGGDRQARELRDQLDQRDQLVKRLQE
ESAKSEAKVNRLVEAVEKAQGSESQYQVVARRAERESRELREKSLRLEKDLENWKSRLEA
YVNNNSNFEPSFV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG