YALI0F13321g

Overview

Description some similarities with uniprot|Q7RXD3 Neurospora crassa NCU05051.1 hypothetical protein
Locus type CDS
Locus tag YALI0F13321g

Location

Species Yarrowia lipolytica Positions 1785483..1787973
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2491 (nuc.)
Previous locus YALI0F13299g Next locus YALI0F13343g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F13321g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F13321gYALI0F13321g_mRNA-001YALI0F13321g_CDS-001

Nucleotide sequence

 

>YALI0F13321g
ATGGACCATCTCTCTCAAGCAGGTGCAGACCCGACCAAGCGCAAGGCCGACTCGCAGCCC
ATGGTCAATGTGGTGCCGATCCAGCCTTCGTCGGTGGAACGATTTTCGCCCTATCCCGTC
AAACAGCGGCGAAAGCGCGTGCCCAAAAACTGCTCCTCGTGTCTCAAAAGTAAAACCAAG
TGCGACCGAGAACGCCCGTATTGCGGCCGATGTGTGGAACGAGGCCTGACGTGCGAATAC
GCCTGCGAGGCCGACGTTCCGTCCATGGCCGGACTGCTGGCCGACAACAAGCGACTCAAT
GAAGACCTGGACCGGCTCAAGCGACTCATGGACGATGAACATGTGCTGGAAGAAAGCATG
CCGTCGCTGGTCATGAAGAACATCATTGTGAAAGATACCAAGGACGCCGAAGAACTGCCC
CAGGGCTCGCCAGAAGAACCCCAGGAATACAAGGAGCCGTCCAGAGACGATAACGTGGGT
ATAAACAGATTGACGCTCATTGGACACACAGGCAGCAAACTGTGGTCGTCGTCGCTCATG
AGCGTCAACCCAGGCTACCACTGCGCCACCATCTATGGAAACGTGGATATGACTTCGGAT
TTCTGCTTTGGAGGACAGGTCCAACAAGAAAGGCTGAAAACAACACCGGCGTACCCCATT
CATAACCCCGAGTACCACCCGGTGTCATCAGTGCTGCTCAACTACTTTTTCCAGCATATT
TACTACTTTTGGCCGTTGCATCACGAGCCTTGGGTCAGAGACAAGTTCCAGCTCATCATT
GACCAAAAGGCGGAACTCAGTAACGTGTCGCTGGTCTTGTCTGTCTTCTCTGTCGCAGCC
TATGCACTCAACGATGAGACGCGACTCTATCTTCAGGGCGTTTTGCCTGCCGGCGGAGCT
ATTACTGTTGATAACATTGCAGACTCCATTCATTTGGCTGCCCATCAGTCTCTGGATGCT
GCCTGTATGATCAACAGACCCAGTGTGGAGACTCTGGGTTCTCTGGTGATGCTCCAAGTG
TCTGCCTCCATCAGGTCGCCTCTTGGATGCGTCACTACTCCTGTCTTCGGAACCATTGTC
GACCTGGCCTACTCTCTGGGTATGCACCGAGACCCCTCAAACTTCACCACAGACCCTGTG
GAGGCCGAGTTCCGACGCCGAATCTGGTACGAAATCGTCGCACTGGACCGACAACGAGCT
TCACATCTTTTCAGACCAACTTTTGTGTCTCAAAACTCGTACGACACTCTGTCTCCTGGT
AACGTTGAGGGCGACAATATCATTTTGGCAGGTGTTGTTGTCTACCGAGCCCTAGCAATT
GAGGCATTTGTGCGTCGGCTGGTGTTTTCGTCCAAACCTGTGTCTTACAACTACATTCTG
TCTGTCGATAAACATCTCCAAAGTGTGCTTGAGAACCGTTCGTGTGCTCGATTCCGTGTC
CCTGAGGATTTTGCGACGGTCAAAGATCCCAAGGTTGTCCCCACACGTCCCTTTCCCCAG
GACGAAATCACAGCAGTTATCATTGAGTGTATCCTGCTGAGATCCATAATGATTCTGCAC
AAACCCTTCATGCGGGCTTACAGATGTCCCCACTACACTGAGCACTACCACAAGTCGTAC
CGGTACTCTTTCATTCGGTGTTGGGAGGCTGCTCGTCGAATCTCGCAGATTGTACTTGCT
CTACATGAACGTCCCCATCTCACCAGCAAGTACACCTTCCTCACCTCTGGTGTATGTTTG
TACCACGGTATTGACGCCACCTGTCTCATTGGTCTGTCGTACCTGCACTCCAAGTCGGAG
ACCGACCCCAACAGTAACGGAGATATGATCATTCTGCAGCGAATGAAGGAGCTGATTCGA
AAGCTTGTGCCTACGTCCATTGTGGCGCGGGAGGCCAACGCGCTGTTTGAGCGAATGTAT
GCCGTGATTCACAAAAAGTTTGCCAATAAAAAATCAGCCGCCAGCGTCACAGGAGCCGGC
TCTCGATCGGCATTCAGAGGTCCCACGGGACACCAACATCCGATTCCTGACCAGCAACAG
CAGCAGCAGCCGCAGCAGAAGCAGCAGGGTGCCGGAGGGGATGTAAGCCAACCTACTCCT
CCTTTTGTTCCTCATGACGCTTCTTCCACATCTTCGGTATCATCTACGTCCCCCGATGTC
ATTGCAAACCAAATGCTGCGACCGCCGCTCATGTTTGCCCCTAACAACAACAATCCCGCC
CCAACAGACGGCTCCGAGGAGTTTGATATGCAGTTTTGGGAAGGCTACTTCCCGTCTCTG
TACTTCCCCAATCCCCCTTCTGGTTCCAACTTGCAAGCCGACCCGGCTCCTCAGGAAGTT
AACAACAACGATCTTTTTGGCGAAATTCCCAGCGAGCTGTTTTTCCCCGTCGAGTCCTGG
GTGGACGGTCAGCAGAGTGGCAAGAGTGTCATTTTCTAGTCTCTCTTCTGCATTATTTAT
TGTGTAATTAACGTGTATATTTACTTTCTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F13321g_CDS-001

Protein length: 813 aa.
Product: Conserved hypothetical protein

>YALI0F13321g_CDS-001 MDHLSQAGADPTKRKADSQPMVNVVPIQPSSVERFSPYPVKQRRKRVPKNCSSCLKSKTK
CDRERPYCGRCVERGLTCEYACEADVPSMAGLLADNKRLNEDLDRLKRLMDDEHVLEESM
PSLVMKNIIVKDTKDAEELPQGSPEEPQEYKEPSRDDNVGINRLTLIGHTGSKLWSSSLM
SVNPGYHCATIYGNVDMTSDFCFGGQVQQERLKTTPAYPIHNPEYHPVSSVLLNYFFQHI
YYFWPLHHEPWVRDKFQLIIDQKAELSNVSLVLSVFSVAAYALNDETRLYLQGVLPAGGA
ITVDNIADSIHLAAHQSLDAACMINRPSVETLGSLVMLQVSASIRSPLGCVTTPVFGTIV
DLAYSLGMHRDPSNFTTDPVEAEFRRRIWYEIVALDRQRASHLFRPTFVSQNSYDTLSPG
NVEGDNIILAGVVVYRALAIEAFVRRLVFSSKPVSYNYILSVDKHLQSVLENRSCARFRV
PEDFATVKDPKVVPTRPFPQDEITAVIIECILLRSIMILHKPFMRAYRCPHYTEHYHKSY
RYSFIRCWEAARRISQIVLALHERPHLTSKYTFLTSGVCLYHGIDATCLIGLSYLHSKSE
TDPNSNGDMIILQRMKELIRKLVPTSIVAREANALFERMYAVIHKKFANKKSAASVTGAG
SRSAFRGPTGHQHPIPDQQQQQQPQQKQQGAGGDVSQPTPPFVPHDASSTSSVSSTSPDV
IANQMLRPPLMFAPNNNNPAPTDGSEEFDMQFWEGYFPSLYFPNPPSGSNLQADPAPQEV
NNNDLFGEIPSELFFPVESWVDGQQSGKSVIF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG