YALI0F11165g

Overview

Description weakly similar to uniprot|P38262 Saccharomyces cerevisiae YBR103w SIF2 SIR4P interacting protein
Locus type CDS
Locus tag YALI0F11165g

Location

Species Yarrowia lipolytica Positions 1480255..1482226
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1972 (nuc.)
Previous locus YALI0F11143g Next locus YALI0F11187g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F11165g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F11165gYALI0F11165g_mRNA-001YALI0F11165g_CDS-001

Nucleotide sequence

 

>YALI0F11165g
ATGTCAATCACATCGGACGAGCTAAACTACCTGGTGTGGCGGTATCTGCAGGAGGCGGGT
TTCGAACATACAACATATGCGTTTCAGCGCGAGGCGGGCGTCCATCATTTGGACAAGCAT
TTCTCTAACCGCATTCCTCTGGGAGCGCTAGTCAATGTGGCACAGAAAGGAATCCAGTTC
ATGGAGGTGGAGGCCAGCGTCAAGGAGGATGGCACGATTGTGGACTCGGACGACAAGCCG
TTTTCGCTGTTTGGGAACGACTACGTGCGCAGTGGGACGCCAGAGATTGAGGAGGAGCAG
ACTAACGCTTTGAAGGGCGCAGCCACGGCGTTGCTAGCTGCTCCGTCCGACATTACCGCA
GGTGCAAATGTGGCCGTGACTAAAATCGATCCTGGATTGCCTACCACGGCTCCAACGTTA
ACAGCACCGGCAAACAACAACAACATAAAGAAGGTAGTGGCTGCTACCATGACAGACAGG
GCAACCAATACACAAGATACACAGAATGCAACGTCGCAAAAAGACATGACGCGCGAGGAG
GTGCCGATAATCTCGTTGACGCCGTCGGTGGATGTGGGTTCTGTGTCTCAATGCCAGTGG
AGTCCGGTTGACAAGAATGTGTTATTAACGGGAGCGGCCGGACCAGTTGCTTCGTTACTG
GTGCTCAACAAGGGAGGAGAAGAGGAGGAGGGAACGGCGGGGACTTTACTACCTACTCAC
GGCGACGAGATGGATGTGGATTCTGAGGATACCAACAGTACGAAAAAGATGGTCAAAATT
GCGTCAACCACAAACCTCGCACATTCGCCGATTCCCCAAGGCGACAAGGATATTACTGCA
GTGTCGTGGAACAGAATCGGAACGCTTTGTGTGACAGCTGCGTTTGATGGCCAACTACGA
TTATGGACTGCCCAAGGCAAGCTACGACACATTCTCAGTTTGCACAGAGCTCCGATTTTG
TCTGTCAGATGGAATAAGACGGGCTCGTTGGTGCTGTCTATCGATTGCACAAACACGCTG
GTTGTGTGGGATACCACTTCGGGCGAGGTGCGACATCATCTGAGCCTCACGGTGGCTCCT
CCTCCTGCTTCGGCAGCTGTTTCGGCAGTGTCAGCGGTCGTGGGAGATATCCAAGCTGCT
CTGGGGGGTAAGGACGAGAGCCACGAGTCTGCTGAGTCGATCACAACCGGGTTTGATGCT
GACTGGATCGATGGATTGACATTCGTCATGACTGGAGAGAACCATTCGATTGTGGTTTGC
AGGGTTGGTGAGAAGCTGCCTCTGCTAGTGTTCAAGGGCCACTCGGCAGGTATTAACGAT
ATTCAGTTTGATCACGTGGGTTTACTTCTGGCATCGGCTTCAGATGACCACTCTGTGCGG
TTATGGCAGGGTCGATCGGTCGCGTCTACAGCCACTCTTCTCGGACACACGGCCCCCGTC
ATGGTGGTACGATGGCTTCCGTTACTCAACGCGGCCAATCTTGTTGGAGGTGCCAACATT
GGCACCATGAGTCTTGTGGTGAGTGCTTCTCTCGACGGAACGGCGCGTGTGTGGCTGCCT
GAAAACGCTCGTTGCCTGGCGGTGTTGGCGCTGCATGAATCTGCTATTTTTGCCATGGAA
ATCTCGCCCGACCGCAAGTGGCTGGCGACAGGAGGCATGGATGGCGTGCTGGTCTTGTGG
GACCTGGCAGGACTGGAGGACAATGAATGCACCGAGGAGGGCGCCGGAAGAGCTCTGGCG
CGCCTGGAGATCGGGGCTCCCATTGATTGTATAGGCTGGAATCTCGAGAGTGACGTCATC
TGTGTGGGAACCAGCGGCAAAAGTTATGTGGTGGAGTGGAACGAGGGCATGAGAGAAACC
AAGGTGGTGGCATAGAAGGAGGGGATGGTAACGGGTTAATCAAGGGTCCCCGAAAACATA
AGACACGGTATAATAATGTAAAATAGCTAACTGATGACAAGAATTGCACACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F11165g_CDS-001

Protein length: 625 aa.
Product: Conserved hypothetical protein

>YALI0F11165g_CDS-001 MSITSDELNYLVWRYLQEAGFEHTTYAFQREAGVHHLDKHFSNRIPLGALVNVAQKGIQF
MEVEASVKEDGTIVDSDDKPFSLFGNDYVRSGTPEIEEEQTNALKGAATALLAAPSDITA
GANVAVTKIDPGLPTTAPTLTAPANNNNIKKVVAATMTDRATNTQDTQNATSQKDMTREE
VPIISLTPSVDVGSVSQCQWSPVDKNVLLTGAAGPVASLLVLNKGGEEEEGTAGTLLPTH
GDEMDVDSEDTNSTKKMVKIASTTNLAHSPIPQGDKDITAVSWNRIGTLCVTAAFDGQLR
LWTAQGKLRHILSLHRAPILSVRWNKTGSLVLSIDCTNTLVVWDTTSGEVRHHLSLTVAP
PPASAAVSAVSAVVGDIQAALGGKDESHESAESITTGFDADWIDGLTFVMTGENHSIVVC
RVGEKLPLLVFKGHSAGINDIQFDHVGLLLASASDDHSVRLWQGRSVASTATLLGHTAPV
MVVRWLPLLNAANLVGGANIGTMSLVVSASLDGTARVWLPENARCLAVLALHESAIFAME
ISPDRKWLATGGMDGVLVLWDLAGLEDNECTEEGAGRALARLEIGAPIDCIGWNLESDVI
CVGTSGKSYVVEWNEGMRETKVVA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG