YALI0F11143g

Overview

Description some similarities with uniprot|P38261 Saccharomyces cerevisiae YBR102c EXO84 exocyst protein essential for secretion
Locus type CDS
Locus tag YALI0F11143g

Location

Species Yarrowia lipolytica Positions 1476932..1479100
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2169 (nuc.)
Previous locus YALI0F11121g Next locus YALI0F11165g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F11143g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F11143gYALI0F11143g_mRNA-001YALI0F11143g_CDS-001

Nucleotide sequence

 

>YALI0F11143g
ATGTCGCTGGAGCCTCCGAACCAATCGCTACGGTCGCACAGACAGACGGCCAACCCGCAC
GTGATGGCCGCGGCGGTCCAGAAGCAGAAGCCGTACATACAAGACAGCACACATCTCCAA
CTGCCCAATGTCGGCGATAAGGACCGAGAAAGGGTTGGAAACATGGTGAAGCGGCGGTTC
AGCGCCCGTATCCCAGGTCAGGGCGTGCCCTATGACGCGGCAGCGGCGCCGAGCTTGCCC
GTGGGTGCTGGGAGCATGATTGACGACGCTGTTGCTGCTGGAGGAGTTCCGGTGACAAAA
AGCAAAACGATGACTTCTCCGGCCAAGGCGGCCCCCGTGGCCTCGGGCGCTTCAGGAATG
CTGCTCAAGGAGGATCTGGACGCGCACACGTTTGTCACGCAGCAATTGGCCACCTCCAAC
GCTGAGGAGGTCGACCGGTTCGTGTCGAAACTCAAGAGTCTCAAATCGAGGCTCGTGGAC
GAACAGCGAGAGGCCATGTACACAAACTACAACTCGTTTCTGACCGTAAACAAAGAGATT
CTGGCGCTCAACTCCGAGGTCAAGTCCTTGGGCCAGGCCGTCAGCAACTTCAACGTTGCG
GTGTCCGCCATGGTGGAGGACGCTCTGGAATCCACCTCCAGTAAGTCGCAGGAATCGTCG
CAATCGTCGCTGGCGCTGCCCGACTCGTCGGCCCGAAACAGAAACTCCATGGTCATGTTG
GAAAACATGTGGGCCAACGAACTGGCGTCGCTGTTCAAACATGTAGAGGGAGCCGTCAAG
TACTTGCCTGCTATTCCTGGAAGACACGTGGTGGCCGAGTCGGGCGCATGGTACCAGCTC
AACGCCGCCACCTGGAAACCCCTGCGACCTGTGCACATGTTTCTGCTGAACGACCATTTG
CTGATTGCAGCCAAGAACAGAAAAAAGGATAACATGCAGATGCAGCAGACCCAGACTCTT
GTGGCGGACCAGTGTTGGCCGCTCAGCGACATTGAGTTTCTGGATCTCTCCGTTTCTCGC
CGAGGAACCCATCCCGTGGTCCCCAATGCAGTTTCTGTCGTCTGCGGAGGAGTCACCTGC
GTCTACCAGACGGAAAAGCCCGCCCAGCACGCCAAGGTTGTTTCGGCTTTCAAAAAGGTG
GCTGGCGAAGGCAGAAAGAACGACACCAACAAGACCCAGCAGCAAATTCGGCTCAGAGAA
AGTATGACGTACTATGCTGCTCGAAACCCGTCTCTTCGGGGTCACAAAGAGCTGTTACAG
GGGCTCAGCAACTCCAAGGGCCACTCGAGGTCTTCATCGGTCGACATCACCGGCCGAACG
AAAAATCTGCGAGAGATTGACGACCTGGTCAACGATCTGGACGTGAAAATCGCACACAGG
CGGTTTGCCGAAGCCACCGACATCATTTTGGAAAACATCAAGGACGACAAGGAGAGCACC
GACATTACACAGCAGGTGCTCGACATCAAACTGCATCAGCGTCAGGACGAGTTGGTGGCT
CATCTCATTGATGATGTGGCTACAGACACATCCAACACTGCCGTCACACACGCTCTGGGT
CTGCTGGTGCGTTTAGGACACGGAGACCAGGCCCGGGGAGTCTACCTGGAAACTCGAAGA
AACCTCATTCACAAGCGAACTCGTCAGGTTGAGTTGCTGGGCGACATTCCTGGATATATT
GCTCAGGTGGCAGTCACGTATTTCCGGTTGATCCGATCCACAGCCGAGGTGTTCCGAAAG
TGCTACACAGACAACCATTTGGCGTCCAGTATTGCCGAGTGGGCCAAGAGCATGGTGGAG
GAATTTGTGCTGCTGTTTGCTCGACAGCTGTATGGAGTGAAGCCCGACACTCAAACGTAT
CAACAGTGTGTCTCTATTACTAGACAGCAGGCTGCGCAATTGAGCGAGGTGGGTTTGAAT
CTGGACTACTTGCTGGATTACGTCTTGAGCCCAGCTCGAGCTAGCAAGGCATAGGCATGT
AAGTACTGTATTTTTTATTAACGAAGATGGGGATGGAGATGGGACAAGGAGGAAGGAGGA
TCAGCGCAAGTCTGGGGACCGTATCAAGGGCCTGTTGACAAATCAAATGCCACAGCCAGT
CTCTCCACGGCTTCAGCTTCAAAATGGACCCTTCGGATGTTCTATAGGTATTGTGATGGT
GTTTCTTGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F11143g_CDS-001

Protein length: 658 aa.
Product: Conserved hypothetical protein

>YALI0F11143g_CDS-001 MSLEPPNQSLRSHRQTANPHVMAAAVQKQKPYIQDSTHLQLPNVGDKDRERVGNMVKRRF
SARIPGQGVPYDAAAAPSLPVGAGSMIDDAVAAGGVPVTKSKTMTSPAKAAPVASGASGM
LLKEDLDAHTFVTQQLATSNAEEVDRFVSKLKSLKSRLVDEQREAMYTNYNSFLTVNKEI
LALNSEVKSLGQAVSNFNVAVSAMVEDALESTSSKSQESSQSSLALPDSSARNRNSMVML
ENMWANELASLFKHVEGAVKYLPAIPGRHVVAESGAWYQLNAATWKPLRPVHMFLLNDHL
LIAAKNRKKDNMQMQQTQTLVADQCWPLSDIEFLDLSVSRRGTHPVVPNAVSVVCGGVTC
VYQTEKPAQHAKVVSAFKKVAGEGRKNDTNKTQQQIRLRESMTYYAARNPSLRGHKELLQ
GLSNSKGHSRSSSVDITGRTKNLREIDDLVNDLDVKIAHRRFAEATDIILENIKDDKEST
DITQQVLDIKLHQRQDELVAHLIDDVATDTSNTAVTHALGLLVRLGHGDQARGVYLETRR
NLIHKRTRQVELLGDIPGYIAQVAVTYFRLIRSTAEVFRKCYTDNHLASSIAEWAKSMVE
EFVLLFARQLYGVKPDTQTYQQCVSITRQQAAQLSEVGLNLDYLLDYVLSPARASKA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG