YALI0F11187g

Overview

Description weakly similar to Yarrowia lipolytica uniprot|Q6CFY1 YALI0B02596g, unknown function
Locus type CDS
Locus tag YALI0F11187g

Location

Species Yarrowia lipolytica Positions 1482471..1483715
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1245 (nuc.)
Previous locus YALI0F11165g Next locus YALI0F11209g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F11187g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F11187gYALI0F11187g_mRNA-001YALI0F11187g_CDS-001

Nucleotide sequence

 

>YALI0F11187g
ATGAACCGGATACCTATTGAGATACAGAACGAGATTTTGAGACACTGTGATTTGTCAGCC
GCTGTCAGCCTTCGAGACACGTGTATCACGTGGCGAGAACTGTGTTCTGAGTCGGTTCTG
GCCAGCAAGGTGCAAAGTAGAGTGCCTTGGATGACTCCTGGAGAACATAATACGAGTCTG
GACTCTTGGGCTCTTTGTGCAAAAGTTGTTTTGAGCCGTCGGAAAGCCATTGATGGCGGC
AAGTATGACCATGTGGAGTTGCTGGACCGAATTCCAAACTTCAAGGCTGGCAAAGTTGAG
TATTTGACAGCCGAGGAAGTGACGACTTTACCTCCAGGATACCAGTCTGTTTTCGATTCG
GTTTATCTGCGGTCTGTTGCCGATGCAGAGCCGCAATTGTTGGCTCTTCGCGGCTCATCT
TTGTACATCAATAACCGCCAAGCAATGTTGGATCTATATACACTGGATGTGAAGCCCACC
AACGTGGATATAGCCAACGAGGGGGTTCTGGAGTTTGAAGAAACCGCCACCAATAACGTG
TATGAGTGTCACGGATGCTCCATTGAGCTTCCTGAGGGGGCAGAAACTCTTCGTTTTTAC
TCTGGAAAGAAACAAATGGTGGTCTATTATGACATCGAATTGGAGGAGCGGGTATGTGTG
ATGGATAGGAAGCCCAGCATGAGCTACAAGGACGGGTTTGCGTTTGTGTTCAACGCGGAA
ACCATGAAGGTTCATGTTGCACGAGAGGCTGTGTTTTTGACCCAGGTTGAAGATCCCTAT
TTCTGCACCTATTGGCTTGATGTGGGAGCTCGAACCCGGGTTGTTGTGGCCAAGTCTGAG
TTTGAGCAGCCCTACGACGAATGGACCTTGTGGTATGAAGATGTCTTCACCTACAATGGA
CTGTTATGGCACACTTTTGATGAGCATGTGGTTCCGTTGGTGGTGGACCTGGAACATCTG
GACAAGACAGGATACAAGCCTCAGCATATTATCCAATGGTCGGATGGTGGAGAAACTCAT
CAGGGCAACGACGGCAGCGAAAGCTTCTTTGGAAGCAAAACCTCCACCACTCAAGCTACA
GATATGGCTACTTACACAAATTATAGAGTCAAGGAGGACCGCAACTATGATATGGACGAT
GTCTTCTTTCCGGGGACAGTCGAGGGCCATTTTGGTTTCTGGAAATGGAGTGGAGACTAT
GCCGATCGAGTCATCAATGCAGCTATATCAAGTCTGAGAGAATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F11187g_CDS-001

Protein length: 415 aa.
Product: Hypothetical protein of a 30-member gene family, conserved in the Yarrowia clade

>YALI0F11187g_CDS-001 MNRIPIEIQNEILRHCDLSAAVSLRDTCITWRELCSESVLASKVQSRVPWMTPGEHNTSL
DSWALCAKVVLSRRKAIDGGKYDHVELLDRIPNFKAGKVEYLTAEEVTTLPPGYQSVFDS
VYLRSVADAEPQLLALRGSSLYINNRQAMLDLYTLDVKPTNVDIANEGVLEFEETATNNV
YECHGCSIELPEGAETLRFYSGKKQMVVYYDIELEERVCVMDRKPSMSYKDGFAFVFNAE
TMKVHVAREAVFLTQVEDPYFCTYWLDVGARTRVVVAKSEFEQPYDEWTLWYEDVFTYNG
LLWHTFDEHVVPLVVDLEHLDKTGYKPQHIIQWSDGGETHQGNDGSESFFGSKTSTTQAT
DMATYTNYRVKEDRNYDMDDVFFPGTVEGHFGFWKWSGDYADRVINAAISSLRE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG