YALI0F09009g

Overview

Description weakly similar to uniprot|E4ZTM8 Leptosphaeria maculans hypothetical protein LEMA_P118870.1
Locus type CDS
Locus tag YALI0F09009g

Location

Species Yarrowia lipolytica Positions 1257657..1259878
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2222 (nuc.)
Previous locus YALI0F08987g Next locus YALI0F09031g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F09009g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F09009gYALI0F09009g_mRNA-001YALI0F09009g_CDS-001

Nucleotide sequence

 

>YALI0F09009g
ATGGACAAAATCAAACCGGATAAAACCAAGAACAGCGCGGCAAAACCGACCAAGCACACA
ACGTACTTTCTCACGGCCGACTGCCCGAAATCCCACTCCACCACGACCGTCACCAAGGTG
TCCCATCTGCCCCAGGAGTCGCCACACGTGCCGCTCAAACCGTCCATGAGCTGCGACTCG
GTCGACTCCTTCTTCTTCTCCGACGTTTCAGTAATCAGCCGCGCAGAGGTGGACGGAGAA
CACAAGCAGGAAGACACAGACTCGGCCGTGCAAGACACGTCGACCGAACAACCAGACCCC
AACATTACAGCCACCAATATGGAGGAAACCTCAGATACCTCATACGAAACTAGAGTCCAT
CCCTCGTCCTCCAACTACTCACACTCCACCACAGGTTTAAACTACCCTCTCAACATGCAC
CCCCACCTCAAATCTCTCTCGGTTGTGTCGTCCAAACCAGCATCCCTGCTGTCCATGGAC
AGTGCGTCCTCAAGCCCCCGACTGGACGCCTCGGATAACCTCCTGTCCGAAACCCTGCTT
TCTTCCGACGACGACGAAAGCGAAGGAGGCACACGGGTCGAGCAGCGAATGCCCCAGTTC
ATCATGCCTACCATCCCTCTCACGTCCCGACGACCATTCACAGAGACGGGACTACGACTC
GGAAAACTCAGAGTCATGGTTGCAGGTCAACGACACAGCGGCAAGTCCGCTCTCATCCGC
TCCTTTGTGCAACAGTGCAAGGATATCGTCTACGTCGACGCCGCTGCACCCATCGTGACA
CCGCTGCCACGCTCCAAGGCGGCACGCAACTTCCATGAACCAGTCATGTGGGAAACACAG
GCGTCCACGCGACCTACCCCCGTGTTTGAGACAATGTCTCCAGGAACCGTCTCCGAGTCG
TCCACTCTGACGGCAACAGACAACTCCACTTCGACCCTAGACTTCAACATCTCCTTTGTC
GAATGCTCGCAACACTCGGTGGACTGGCTGGACCATGCTATCGCGTATCTGGAGCAGCAG
CTTCAGCGCACCTCCCAGATGATCAACCCCATGAGCCCAAACTGCTCCAAGATCATGATG
ACGTCATCGGGCATGGATAACGTCGACGCTTGCTTGTTCCTGTTGAGTAAGCCTCCTGAC
GCCGAGCAGCTGGAGCAAATGCGCATTCTGTCGTCGTATGTGCCCCTTATCCCGCTGGTT
TCGAAATCAGACTCGCTCAGCGACCGCAAGCTGGCTGCTCTGAAGCTGCGCATTCTGCGA
GACCTCGAGAGAGAAGGTATTCAGCCGTTTGCCTTTGACTTCTCGGTCTCCGACATTTTG
TCCGTTTTCGAAGAATCGGACTTGTTGTCTTCAGACGATGATGACCAGCAACAACCAAGG
CAGGCGCAGTCGCTTGCTACTCCGCTCATTCGCCGGTCCACAACCCCTCAGTTTCCCTTT
TCCGTGTCCGCTGTGGCTGAGTTAGAGCTGGACGCGTCGGTGCTCATGAACCCCAATTAC
ACACCCAAATTGGTGACTTCGGACCTGGATATGCTTTGCGGACAGCTCTTTTCCGAGAAA
GGAGCTTCTTGGCTGCGCTACAAGTCTGGCCAGCAGTTTATCTCCTGGGCTGTCACAATG
CAGCAGGCTGTGACCCTGCGTGGCGTTCGGCGCGTGGCTCACGAGCCCGTACCACAATTC
TATATTCCAGAGTTTGTGGTGTCACCGGTTGCCGTGCCACTAACCATTGATCACAACCTG
CTAGCAAATCAGAGTACAGTTGACTGGATTTCGCACTTGAAAACCGAGTCTGGCGTTCTG
GTTCAGGTGACCGAGAGCCGAGGGCCTGCCTACAACTGTCTGGGATGCCAGAAGTACTCA
CACTCGATTTCCAATGTGGATCCCCTGGAGCTGAAGCGGCACTTCAAACTGCTGAACAAG
CTTGTCAGCTGGGCGTGCAAGGCGCTGAGCTACACCATTGGAGCTTCTCTGGTGGTCAAG
ATGGTCACCGTGTGTATGCAGGGCGAGTTGTATGCTCCCCCGCCACCTCCACAGACGGTG
TCCAAAGAGGGACCTCTGAACGACGCGGCACAGATGCTCTGTCGAGTGTTTGAAAATGTG
AGTCGCGAGCTGATGGCTGTAGCCGATTTTACCTTTTAATAGATTTACGAGAGGCAATTA
AGGGGTACCACTTGTACCACCAATAGGGGATCTTTACGTTTAATACATGATTAAATATCA
GA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F09009g_CDS-001

Protein length: 713 aa.
Product: Conserved hypothetical protein

>YALI0F09009g_CDS-001 MDKIKPDKTKNSAAKPTKHTTYFLTADCPKSHSTTTVTKVSHLPQESPHVPLKPSMSCDS
VDSFFFSDVSVISRAEVDGEHKQEDTDSAVQDTSTEQPDPNITATNMEETSDTSYETRVH
PSSSNYSHSTTGLNYPLNMHPHLKSLSVVSSKPASLLSMDSASSSPRLDASDNLLSETLL
SSDDDESEGGTRVEQRMPQFIMPTIPLTSRRPFTETGLRLGKLRVMVAGQRHSGKSALIR
SFVQQCKDIVYVDAAAPIVTPLPRSKAARNFHEPVMWETQASTRPTPVFETMSPGTVSES
STLTATDNSTSTLDFNISFVECSQHSVDWLDHAIAYLEQQLQRTSQMINPMSPNCSKIMM
TSSGMDNVDACLFLLSKPPDAEQLEQMRILSSYVPLIPLVSKSDSLSDRKLAALKLRILR
DLEREGIQPFAFDFSVSDILSVFEESDLLSSDDDDQQQPRQAQSLATPLIRRSTTPQFPF
SVSAVAELELDASVLMNPNYTPKLVTSDLDMLCGQLFSEKGASWLRYKSGQQFISWAVTM
QQAVTLRGVRRVAHEPVPQFYIPEFVVSPVAVPLTIDHNLLANQSTVDWISHLKTESGVL
VQVTESRGPAYNCLGCQKYSHSISNVDPLELKRHFKLLNKLVSWACKALSYTIGASLVVK
MVTVCMQGELYAPPPPPQTVSKEGPLNDAAQMLCRVFENVSRELMAVADFTF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG