YALI0F08987g

Overview

Description weakly similar to uniprot|B5RT07 Debaryomyces hansenii DEHA2B10076p
Locus type CDS
Locus tag YALI0F08987g

Location

Species Yarrowia lipolytica Positions 1253736..1256059
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2324 (nuc.)
Previous locus YALI0F08965g Next locus YALI0F09009g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F08987g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F08987gYALI0F08987g_mRNA-001YALI0F08987g_CDS-001

Nucleotide sequence

 

>YALI0F08987g
ATGTCAGTACACAAAACGACCCCCAAAGCGTTCCAGACAGACGCGCTACGAAGAGTCGCC
GACTGGACCAAGGGAATTGCCGGCGCTGACCCCGAGCCCATCAAGGTGGGCCTGAGCACC
CAAGACTTCACCTTCGGTAGCTCGTCCTACAAGGCGGGACCCCTGACTTCGGTGGGACAG
GGCGGCAACCTGGTGTGTATCTGCGACACCCAGCGCGACACGCTGCAGATCTGGAACTGC
ACCGATGGCAACACGTACTTGCTGAGCACATGCAAAACCGTGGAAACAGAGGGAGGAACG
GTGGTGGGCCTACATGCCCTCGACTCAACCGAAGTAGTGGTGCAAGTGCGACTCAAGAAG
ACGATCCAAATCAACGTCTACGACACAAAGACCCTGAGTCTAGTACACACAATGGAAGGA
CCTGTCAAAACGCCAGATAGCTATACAGTCAACCAAGCTGTTCGTTATCTTGTTTTGACC
GCTCCTACAGGCGAGTTTTTTGTGTACAAGCGACCCAATTTCGAACTGACCGAAATCACC
GGCACTGCAAAGGTACAAACAACACAGATTCAGCCTGCAGCGGCTCAGAAGCAGCGCGAA
TCCAGCATTCTGCCTCCGTTCCCACACTCGGCTCCCTTGCTGGATCTTCAAGGCAGATGG
TTGGCGTATTGTCGTGATGCTCCCGATCTCGACGGGGTGCTGACCCCCGTGGGTCTTCCT
CCTCCAGGACCTCTGCTGGAGCGAGTGCTTGAGTCACTCTCAATGACGGCCGCCACGTCG
CTCAAGTCGCTGGTCGCAGCAGGCTCCCGGTACTACTGGGGCTACGAGTCGTCGCAGCCC
AACACCGCCACCTCCAAGGCAGGCCTGAGTATGCGATCGTGGAACCTTCTGGGTCGAAAG
CCGCCCATCGTAACCGTGATAGATCTTCAGACTGGAAAAGAAATGTGCTCTTTTTCTCCC
CCGTCTGGTCTATCTTTCCTCTCTCTGTCACCTTACGATCTGTCCATTGCCACAGCCTCT
CACAATGGTGAACACGTATTCACCTATGATCTCACGTTTGCAGACAAGGAGGTGAATCTG
ATTTCGAAGCACCAGCGCGGAAAGACGCCCGCCCGGGTTGGTGGCATCATCTGGACCACC
TCTGGTGGTCTGGGTATCGTCAACGCCAAGCAGGGCTCTCTGCACTGGTTCCAGAGAAAC
ATGGAGTATCCGTTTTACTCAGAGGAGGCCAAGCTGTGGAAACTGTCTGGAGTTCGCCAG
GGAGTCAGTAGCTGTAGCGATGAATCGAGTGTGCTGCTTTTGAGAGGCAACAGACTTGTT
TCTGTCAATCAGGCCTCCGGAAGTGTGAATCACGAGTGGGTCTTCCCTCTTGAGAGTGCA
GAGCCAACCAGAGAGACAAAACAGGTTCCAACTCCCGTGTCTTTCTCCACTCCTGTGTCC
ACCTCCAATGCCTCCTCGGTGTTTCCTTCTTGTGCGTCATCTGTTCACAACTCGGCCACT
CCTCCCTCGAGTCGAGGCTTTCACAGCCCTTCCGGTATTTCTGGCCAAAACAGCGTGTTG
AACGCGCTGCGTGAGACTCAGGAAGCTGCTAACGCTCGGATCTCGGCTGAGCGAAAAGCA
TTACTTACAGCCGTCGACCCGTTGTCTGTCTACGAGCTTGAAACGTGCTCTCCATACCCT
TACTTCCACAGCAACAAGCGAACGATGCAGTCGACGTACGCAGTGGGCTCCAACGGCCAC
GAGAAGGTCCCTTCAGAGTCGCCACAGTTCAATGTCTTTGGAGGGCCCATTGACTACTGT
CCTCTCGATTTTGGATGCGGTACCGGCGAGGTGGAAATGTTTGGAGAGCTGGACATTGAA
GAGTACGACTACAAGGGCCAGGTGTTCAGCGATGCTCCTGGGCTGGACTCAGATTCTCAC
CAGAGCGACCGAGACTCCGAGTTGGCCACCCCCGAGTCTGCAGACTCAGGTTTGCTTCTC
AATGTCAGTCAAGTCGAGCAGGCGTTGGTCGGCAAGCAAATAGTTGCGTAACCACCAGAA
CTGAAGCTCGAGACCTGTACCCACATCAGTATGGGTAGACTGCATGGTTCCGGGCTATTT
AGGTGTGGGTCAGAGACTGCAGACTATGGGCTAGCGTGTGACTCTGTTGACAGTCTAGGC
TTCAACGGGAACACACACACACACACACACACACACACACACACACACACACACACACAC
ACACACACACACACACACACACACACAATCACAATACCCCCAACATATCTACCAATCCCG
ATATCTAACTTATATATACATAAATAACATGTTTTAACTGTGTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F08987g_CDS-001

Protein length: 677 aa.
Product: Conserved hypothetical protein

>YALI0F08987g_CDS-001 MSVHKTTPKAFQTDALRRVADWTKGIAGADPEPIKVGLSTQDFTFGSSSYKAGPLTSVGQ
GGNLVCICDTQRDTLQIWNCTDGNTYLLSTCKTVETEGGTVVGLHALDSTEVVVQVRLKK
TIQINVYDTKTLSLVHTMEGPVKTPDSYTVNQAVRYLVLTAPTGEFFVYKRPNFELTEIT
GTAKVQTTQIQPAAAQKQRESSILPPFPHSAPLLDLQGRWLAYCRDAPDLDGVLTPVGLP
PPGPLLERVLESLSMTAATSLKSLVAAGSRYYWGYESSQPNTATSKAGLSMRSWNLLGRK
PPIVTVIDLQTGKEMCSFSPPSGLSFLSLSPYDLSIATASHNGEHVFTYDLTFADKEVNL
ISKHQRGKTPARVGGIIWTTSGGLGIVNAKQGSLHWFQRNMEYPFYSEEAKLWKLSGVRQ
GVSSCSDESSVLLLRGNRLVSVNQASGSVNHEWVFPLESAEPTRETKQVPTPVSFSTPVS
TSNASSVFPSCASSVHNSATPPSSRGFHSPSGISGQNSVLNALRETQEAANARISAERKA
LLTAVDPLSVYELETCSPYPYFHSNKRTMQSTYAVGSNGHEKVPSESPQFNVFGGPIDYC
PLDFGCGTGEVEMFGELDIEEYDYKGQVFSDAPGLDSDSHQSDRDSELATPESADSGLLL
NVSQVEQALVGKQIVA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG