YALI0F09031g

Overview

Description similar to uniprot|Q6CI91 Yarrowia lipolytica YALI0A00550g
Locus type CDS
Locus tag YALI0F09031g

Location

Species Yarrowia lipolytica Positions 1259867..1261414
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1548 (nuc.)
Previous locus YALI0F09009g Next locus YALI0F09053g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F09031g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F09031gYALI0F09031g_mRNA-001YALI0F09031g_CDS-001

Nucleotide sequence

 

>YALI0F09031g
ATGCTCAATAATGACATTTGGTTGCTGATATTCGAAATCAGCTCCTTGGAGTCGTGCATT
GCTCTCAGTCAAGTGTGCCAGCTCACAGCTCAAGTGTTCCACGGTTTGGAGGACACATTG
ATTAAGGGAATGGTGCAGAGACGGGCTCCTTGGTTTCAGCTGAGTGACCACTTTACAAAA
TGGGCTGATTGCGCCCGGGTACTTGTCGCTAGATCGAAAAGTCATACTTCTATTGAAAAT
CTAGGAGAAGTAGTGGCCAATTGTTCTACAGATGTTGTCAGTGTGGTACCAACAGATGTG
GCCCAAGACGACCAGCTGCGTCAGTCAATGAGTCCCATCTTTAACGATTTCCGACTTGCG
AGTACATGTGGACCCACCGAGGGAGTGATGGAGGGAACCAGAGTCATGTGGCACAATTAT
GAGATTGACCTAACTACAATGGTCGTCAAGAAGAACAACTACGACCCTATCGAAGAAGAG
TACTACCCCCATAGTGAGAAAGAACTTGTATCCACCAGTTCTTCGGGTCTTCAAGTCAGA
CACGAGAACCCGAATGTGCCTGTGGAAGTCATGGCTGAAAACGACACTTTACTCCACGTT
CAATACAACGACGACCACGACTTTCCAGTCGACGAGATACTGCACAAAGAATCGCAGCCA
CGAGATGAAAAGGGCATGGTTGTAATCAGCAACGACCCCAACGCGCGTCAATTTCGCGGC
CCCGTGCACTTGGAAACTGCGGTGGTCAATCTCGTTCCTGGAGCAGCAGGAGCACTCATC
ATCAGACACTACCGCTTCTCTCCAGAGATGTCGTACCTAGCATACATGCTGCCCACAGTT
GACCAGACGGTGATAAAGCTCTGTGCAGTTCCTAGACAGTTCAGATGGACCATTGACTCG
TTCAAAGACGGAAGTATGAAGTTTGCCATTCCCCACAACGGATATGTGTTTGTATTCGCT
TGCGGACTTCTTCACAGACTGTGGATAGACATGGAGACACAAGAACAGGGGGTGATGACG
TCCTGGAACCCCAAATTCCCGGCATTGGGACCCTTCGACGTAGCCCTGGATCACAGCTCC
AAATGGAGACTCTCTCAGGGCTCCCGAAACAAACACTTGGTCACTGCCCGCGACACACAG
GGCTGTATAGTTGGAGATCTGAACACGGGAAAGACATACTTTGCAAGGGGAGCTACAAAA
GATTCTAGCGAACAAACTCCTCCTATCATCCCCTTTTCTACAGGTTCTCCCGTTGACTCT
GTGGGTTTCTACACCATCAACCTGGAGGTATGGCGAAACTTCAAACTCAGCGGTGGCTTC
CATGACCTAACGGAAAGATACAGACAGGTGTGTGAATATGTACAGTCGACGAGATCAAGA
GACGATGAACAGGGAGAGCCTGAGCCTTCCAAGACGACTACCAAACAGGCAATCCACTCC
TTCATGGGATACATGAAAAATGCTGCGGCGTTCTATGATGATGCAGACACCGAGTCCGAC
CAACGCGAATACGAACTGAATCGCACCGACTCAGACTCTGATATTTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F09031g_CDS-001

Protein length: 516 aa.
Product: Hypothetical protein of a 30-member gene family, conserved in the Yarrowia clade

>YALI0F09031g_CDS-001 MLNNDIWLLIFEISSLESCIALSQVCQLTAQVFHGLEDTLIKGMVQRRAPWFQLSDHFTK
WADCARVLVARSKSHTSIENLGEVVANCSTDVVSVVPTDVAQDDQLRQSMSPIFNDFRLA
STCGPTEGVMEGTRVMWHNYEIDLTTMVVKKNNYDPIEEEYYPHSEKELVSTSSSGLQVR
HENPNVPVEVMAENDTLLHVQYNDDHDFPVDEILHKESQPRDEKGMVVISNDPNARQFRG
PVHLETAVVNLVPGAAGALIIRHYRFSPEMSYLAYMLPTVDQTVIKLCAVPRQFRWTIDS
FKDGSMKFAIPHNGYVFVFACGLLHRLWIDMETQEQGVMTSWNPKFPALGPFDVALDHSS
KWRLSQGSRNKHLVTARDTQGCIVGDLNTGKTYFARGATKDSSEQTPPIIPFSTGSPVDS
VGFYTINLEVWRNFKLSGGFHDLTERYRQVCEYVQSTRSRDDEQGEPEPSKTTTKQAIHS
FMGYMKNAAAFYDDADTESDQREYELNRTDSDSDI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG