YALI0F06864g

Overview

Description some similarities with uniprot|P50896 Saccharomyces cerevisiae YDR505C (ohnolog of YLR177W) PSP1 Asn and gln rich protein of unknown function
Locus type CDS
Locus tag YALI0F06864g

Location

Species Yarrowia lipolytica Positions 1014897..1017034
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2138 (nuc.)
Previous locus YALI0F06842g Next locus YALI0F06886g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06864g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06864gYALI0F06864g_mRNA-001YALI0F06864g_CDS-001

Nucleotide sequence

 

>YALI0F06864g
ATGGAAGACGACTCTGCGGTAGCCATGGACGACAAACAGTTCGAGGAGGCCCTGCCACCA
TCGCTCAGAAGCGGAGGGCTCTCGGCCGTGTCCTCTAGAAGGCCCTCGTACGTGTCTGAG
TTTTCCTCTCGCCCAAAGCTCGGCTCTCAACAGAGCTTTGAGCGCACCCCCATGGACTTT
TTGGGCTGGCAGAGCCAGAACGGCTCAGCCCACAACAACAACAACAACAACAACAACAAC
AACACCGCCAACACCAACGCTTCCACTGCCACCGCCAACAACGTCGGCACCCCTGTGACC
TCCCATGCAGACGCCTTTGCCGAGCCTCTCACGTCCACCTCGTCGTACCCGTTTGTGGCA
AAACCGGCCTTCGATGTCGACCGATGGCTCGACGAAAAGGGCGAGGGCAACCAGCAGCGT
CCCCGCGCAGACTCCAAGACAGGCCTCTTCCCCCAGGGCTGGAACATTTGGGCTCACGGC
GACAAGGACTCGCCCTCCGGCAAGGGCCACGCACACACCAACTCATCGGACCTGGCACCC
ATCGGTACGGGCTCTCCACAGAGCGTGCATCCCGTGCTTGCCCGAACCAAGTTCCAGCGG
TCGCTGTCTGTGTCCCTGTCTCGTGACGACGACGCCGACGTGCTGGCCGAACAGGTACAG
CGAATGAACCTGCAGCAACGCCAGCAGTTTGATCGGCCCTTTGGCAAGGTCTGGCACGAC
CAGCAGCAGCAGCAGAACTCTCCGCAGCAACACTCCCCGCAACAGTCCCAAAAGAGTGCG
GCGCTGCCACCACACATGCAGCAGCAGCAGCCCGAGTCGCGACGACATTCGTATGCGGCC
CCCGGAGTGCAGACCGTCTCTGCCGGAGTGCCTCATAATCTATCGCAGTCCGACGCACAG
GACAACTCGGCGCTGCTGACGCACATCCAACAGGCCGAGACGGGCCGGGACGTGGAGTCG
TACTTTGACGACAAGCCCCGCGACAAGGACCTGGCGCAGGAGCTGCTGCAGAAGGAGCTG
GAGCAGCGGGAGCGTGACCACGTCAAGGACGCCATGCCTTCGCGAAAGCTCTATCTGGTG
AGATTCAAGGGCGGCCGGACCGACGTGTTTTTCGTGCCAGAGGCGTCCAATCTGGTGGTC
AAGACCGGCGATCTGGTCATTGTGGACGCAGATCGCGGCCGCGACCTAGGTAAGGTGACT
CGCGACAATGTCACGTCCGAGGAGGCCACCCAGATGAAGCTCAAGCAACAGCAGGAGCAG
ATGGCCGTGTTGCAGCAGACAACCGAGCCAGACGCAAACTCGCTGCCCGCAAACTCGTCG
CTGGTGGTGCCCAAGCAGATTCTGCGGTTTGCTCAGGCAAACGAGATCCAGCAACTGCAG
TCCAAAAAGATGGACGAGGACAAGGCGCTCAAGCTGTGTAACCTCAAGGTGTCCGAGCGG
GGTCTCAACATGAAGATCCTCAATGCCGAGTACCAGTGGGACCGCCGAAAGCTGACCTTC
TTCTACTACTCGGACTCCCGAATCGACTTCCGAGATCTGGTGCGCGAGCTGTTCCGGGTG
TACAAGACGCGAATCTGGATGTGTGCGGTCAACCCCAATTCCACCACTTCTTTCAGTCCT
GGAATCAGCGAGGTGGCCATTCACACGGACGACAAGCAGTCTAAGCAGACCCAGCAGACT
CAGCACAACCAACACAACCAGCACCAGCAGACCCAGCAGCAGCATCAGCAGCATCAGCAG
CAGTCGAAAACCCCCGTCCAGCACCAGCAACCACAGGGCCAGTCTCCACATGTCAGCCAC
CAGGCCGGGTTCCAGGGCTCTCCTAGTCGTCAGCTGAACGGACATGCACATGGTGCTACT
CACGGACACCCACAGACCGGCCAGCCTGGCCATCCACAGCCTGGTCAAGCCCCCTTCTCT
TATCAAGGACCCCCCGGGGGCCCATGGGACTACCAGTACATGTACGAGCAACGACCTTCG
TATCTTGTTAACGGAATGTACACTCAGGGCTATCCCAACTACAACTATGGCGGATTCCAG
TAAATGCGAATCGCCACGGTGGTAACATGTTTGATTATTTATGTTAGAATATTAGAGATG
AGCTAGAATATAAAGCAATGACAGTATAAATTGGTACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06864g_CDS-001

Protein length: 681 aa.
Product: Conserved hypothetical protein

>YALI0F06864g_CDS-001 MEDDSAVAMDDKQFEEALPPSLRSGGLSAVSSRRPSYVSEFSSRPKLGSQQSFERTPMDF
LGWQSQNGSAHNNNNNNNNNNTANTNASTATANNVGTPVTSHADAFAEPLTSTSSYPFVA
KPAFDVDRWLDEKGEGNQQRPRADSKTGLFPQGWNIWAHGDKDSPSGKGHAHTNSSDLAP
IGTGSPQSVHPVLARTKFQRSLSVSLSRDDDADVLAEQVQRMNLQQRQQFDRPFGKVWHD
QQQQQNSPQQHSPQQSQKSAALPPHMQQQQPESRRHSYAAPGVQTVSAGVPHNLSQSDAQ
DNSALLTHIQQAETGRDVESYFDDKPRDKDLAQELLQKELEQRERDHVKDAMPSRKLYLV
RFKGGRTDVFFVPEASNLVVKTGDLVIVDADRGRDLGKVTRDNVTSEEATQMKLKQQQEQ
MAVLQQTTEPDANSLPANSSLVVPKQILRFAQANEIQQLQSKKMDEDKALKLCNLKVSER
GLNMKILNAEYQWDRRKLTFFYYSDSRIDFRDLVRELFRVYKTRIWMCAVNPNSTTSFSP
GISEVAIHTDDKQSKQTQQTQHNQHNQHQQTQQQHQQHQQQSKTPVQHQQPQGQSPHVSH
QAGFQGSPSRQLNGHAHGATHGHPQTGQPGHPQPGQAPFSYQGPPGGPWDYQYMYEQRPS
YLVNGMYTQGYPNYNYGGFQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG