YALI0F06842g

Overview

Description similar to uniprot|P25621 Saccharomyces cerevisiae YCR028c FEN2 high affinity H+/pantothenate symporter
Locus type CDS
Locus tag YALI0F06842g

Location

Species Yarrowia lipolytica Positions 1012108..1013837
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1730 (nuc.)
Previous locus YALI0F06826g Next locus YALI0F06864g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06842g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06842gYALI0F06842g_mRNA-001YALI0F06842g_CDS-001

Nucleotide sequence

 

>YALI0F06842g
ATGAACTGGCTGAGAAAAATCAGAGTGTTTATCTGGGGAGAGTACAAGAGCACGGCCGAG
GAGGAGCACCTGTTGCGCAAGATTGACTGGTTTGTGCTCTCCTTCTGCTGTCTCATGTAC
TTTACCAACTATCTGGATCGAGCCAATTTGTCCAATGCCTTTGTTTCGGGCATGCGAGAG
GATCTCCAAATGTACGGCCGAGAGCTCAACATCGCCAACACGCTCTTCACTGTGGGATAC
ACGGTGGGTATGATCCCCAACAACCTGGCTCTTCAGGTGTTCAAGCCCCGGTACTACTTT
CCCTTCTGCACCATGGCCTGGGGCCTATTGACTCTGGGCACCTATGCTGTGACCACATAC
AAGCAGATCTATGCCATTCGTTTCTTCCAGGGCTTTTTTGAAGCGTCTACGTTTGTGGGC
ACCCATTTCATCCTGGGATCGTGGTACAGTGGTAAGGAGTTGGCGAAGCGAACCGCCATC
TTCACATCATCAGGGCTCATTGGCACACTCTTCTCTGGTTTTCTGCAAAGTGCAGTGTTC
AAAGGACTCAGTGGGAAAGGAGGACTAGCCGGCTGGAGATGGCTGTTCATTATCGACGCC
ATCATCACGTTTCCCGTGGCTCTCTATGGCTTTATTTTCTTTCCAGATACACCAGCGACG
ACACAGGCCTTTTATTTCGACGAGAAGGAGCGCCAGATGTCTGTCATGCGACTCCCGCCA
CGCCCAGACACAAAACTAGACTGGACAGTTGTCAAACGGGTGCTTGGACGATGGCACTTT
TACATGTTTGGGCTGCTATGGGGCATTGCGGGCGAGGTGGAGTCTCCTCCAGCCAACAAC
CTGTTTGGACAGTATCTCAAGGCTTCCGGGTGGAGTGTTATTGAGAGTAACAGGTACCCG
ATGGGCGTTTCTGGAGTCGGAGTGGTGGCTACTGTAGTGGCTGCCTCGTACGTGGATCAA
ACAGGCAAACACTGGCACGTGGGGGTAGCTGCCGGCCTAGTGGGGATCGTTAGCACGGTT
CTGGTGCTGGTGAACCGTACCCCGACCGTCTTTGCAGGCTACTATCTGTGTGGATGTGTC
TACATGGTACAGGCAGCGTTTTTCGCCTGGGCCAACGTGGTGACAGCCAACGACAAGGAA
GAGAGATCGGTGGTGCTCGCCTCTATGAACATGATCTCCAACGCCACCAACGCGTGGTGG
ATGGTGGTTTTCTATGGAGCCGACACCGCGCCCGAGTTCCGTCTGGGTATGTGGGCCATG
CTGGCCGTTAGTATAGCTCTGATCGGCTGGGTTTCTCTAGTTCGATGGTTGCAGCTGAGA
GAAGACAAGCGGGTGGACTTGCACGGCAGTGGAGACGAATCGACAAGTACAGACTGCGGC
GATCACGAGGAATACGGCTCCAAGGCGACACGTCTCGACTCGCTGCCGCCGGCGGTGCGC
TGCCGGTCACGTGACGTGTCCGCCTTCTAGTCTACGAGCAGTGGGGGTTGATGCTGGGTT
CCCATGCGTCCATGTCTACTGTCCCATTGTTGGACTGTTTACCCACCCACTCACCCACCT
TGCGCACCTGACTACCCCACACAACTCTAAAGAGTCTCTCATCTTGGAAGCAACTTAGGG
TTGGCGGGTGAAGCTCCAGCCTTGTCATTTATTTGCAGTACTCGTACAGTCAAGGTGAGC
CAGAGCATATCCGTGTATATAGTTATTTATTACCATGATTGAACAACAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06842g_CDS-001

Protein length: 490 aa.
Product: Plasma membrane H+-pantothenate symporter, putative

>YALI0F06842g_CDS-001 MNWLRKIRVFIWGEYKSTAEEEHLLRKIDWFVLSFCCLMYFTNYLDRANLSNAFVSGMRE
DLQMYGRELNIANTLFTVGYTVGMIPNNLALQVFKPRYYFPFCTMAWGLLTLGTYAVTTY
KQIYAIRFFQGFFEASTFVGTHFILGSWYSGKELAKRTAIFTSSGLIGTLFSGFLQSAVF
KGLSGKGGLAGWRWLFIIDAIITFPVALYGFIFFPDTPATTQAFYFDEKERQMSVMRLPP
RPDTKLDWTVVKRVLGRWHFYMFGLLWGIAGEVESPPANNLFGQYLKASGWSVIESNRYP
MGVSGVGVVATVVAASYVDQTGKHWHVGVAAGLVGIVSTVLVLVNRTPTVFAGYYLCGCV
YMVQAAFFAWANVVTANDKEERSVVLASMNMISNATNAWWMVVFYGADTAPEFRLGMWAM
LAVSIALIGWVSLVRWLQLREDKRVDLHGSGDESTSTDCGDHEEYGSKATRLDSLPPAVR
CRSRDVSAF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG