YALI0F06886g

Overview

Description some similarities with uniprot|Q7SEL7 Neurospora crassa NCU02795.1
Locus type CDS
Locus tag YALI0F06886g

Location

Species Yarrowia lipolytica Positions 1017855..1018864
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1010 (nuc.)
Previous locus YALI0F06864g Next locus YALI0F06908g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06886g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06886gYALI0F06886g_mRNA-001YALI0F06886g_CDS-001

Nucleotide sequence

 

>YALI0F06886g
ATGAATATATTAGCCGCGTTAGAACCTTATTCTCTTTGTCTCCCAACCCATTTCCTTGTG
TCGACGCGTCTCGAGCCTGATAATCTCTTAGTCACCACTACAGTATTTGTGCTACATACG
AAAAAACGCCACAACATCACGAAACAGTCTCGATTTGTCACCATGGACGAAACCAGAGCC
AAGGAGGTCGCTAACGTTGACGCCGAAAAGGTACCATCGTCGCCCGAGAAGCTAGCCGCC
GAAAAGGAGGCCCGACGAAAGGAACGCCGTGAAAAGGAAAAGACGGCTGATCCTGAGCGC
GAGAAGCGCAAGGAAGCAAAACGCAGGGAGCGCGAACGACGAGAGTCTCGGGGCGAATCA
CGAGGAGAATCACGAGGTGATGACAAGGACAAGGAGCGTCGACGACGAGAGAAGGAAAAG
GAAAAGGACAGGGAAAAGGTGAGTATGGTGGGGGTTTTCGGAATATGTCTTGATGGCGAC
TAACTCAGGAAGAGCGACGGGCTCGAAAAGTTGCTTTTGACTCGACCAAGCACGACAACA
ATGGTGGCTCTCCAACCCACCCGGTGCAACAGTCAGCTACGGCGGCATCTCTCTTCTCAG
AGCTACCTGTGCACATCCAGGAGGTTCCACCCTATGTGGGCTGTGAAAAGGACCTCTCTG
TGGCCGAGTTTTCCGACAAGGTCGACATGGCTCGGGTCAAGGAGACTCTGATCGACACTG
TCGTCCCTCACGCCCAGTTCCAGGAGCTGGCACGTGTGGAGCGGTTCAACAACATTTCCT
TTGACGACTGGCAGGCTGAAGGAACTCGACTGGCCGAGGTGGCAGCTTCCCTGATCAACC
GTCTCGTGGAGCTTCGAAAGGCCCGAATTGTGGGCTATAAGGAGATCCAGGAGACTGTCG
ACCGACACGCTGCGAAGCTGGAGTCGCATGGCCAGGAGACCGAGTCCCAGATGTCCGGGT
TCCAGGCCAAGGCCAGTGAGATTCTCAAAATTATCGATTTGACCCTCTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06886g_CDS-001

Protein length: 320 aa.
Product: Conserved hypothetical protein

>YALI0F06886g_CDS-001 MNILAALEPYSLCLPTHFLVSTRLEPDNLLVTTTVFVLHTKKRHNITKQSRFVTMDETRA
KEVANVDAEKVPSSPEKLAAEKEARRKERREKEKTADPEREKRKEAKRRERERRESRGES
RGESRGDDKDKERRRREKEKEKDREKEERRARKVAFDSTKHDNNGGSPTHPVQQSATAAS
LFSELPVHIQEVPPYVGCEKDLSVAEFSDKVDMARVKETLIDTVVPHAQFQELARVERFN
NISFDDWQAEGTRLAEVAASLINRLVELRKARIVGYKEIQETVDRHAAKLESHGQETESQ
MSGFQAKASEILKIIDLTL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG